52 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111662255	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	sall4	Spalt-like transcription factor 4. (1090 aa)
	ENSSLDP00000007173	BPTI/Kunitz inhibitor domain-containing protein. (80 aa)
	abl2	Tyrosine-protein kinase. (1214 aa)
	LOC111653688	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	spint1	Serine peptidase inhibitor, Kunitz type 1 a. (509 aa)
	mthfd1	Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. (934 aa)
	LOC111658500	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	BBS4	Bardet-Biedl syndrome 4. (369 aa)
	ENSSLDP00000008120	Uncharacterized protein. (371 aa)
	ENSSLDP00000010006	Uncharacterized protein; Belongs to the protein kinase superfamily. (337 aa)
	ENSSLDP00000010599	BPTI/Kunitz inhibitor domain-containing protein. (59 aa)
	ENSSLDP00000010840	BPTI/Kunitz inhibitor domain-containing protein. (78 aa)
	mthfd1l	Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. (693 aa)
	LOC111651813	TPR_REGION domain-containing protein. (298 aa)
	ENSSLDP00000013155	BPTI/Kunitz inhibitor domain-containing protein. (73 aa)
	cthrc1	Collagen triple helix repeat containing 1b. (215 aa)
	abl1	Tyrosine-protein kinase. (1118 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (207 aa)
	LOC111656893	Uncharacterized protein. (516 aa)
	LOC111666114	Bromo domain-containing protein. (1445 aa)
	tsc2	TSC complex subunit 2. (1337 aa)
	tsc1	TSC complex subunit 1b. (1281 aa)
	Hectd1	Uncharacterized protein. (140 aa)
	mks1	MKS transition zone complex subunit 1. (564 aa)
	LOC111671741	Phosphatase and actin regulator. (619 aa)
	prkaca	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (343 aa)
	setd2	SET domain containing 2, histone lysine methyltransferase. (2677 aa)
	ENSSLDP00000020697	Uncharacterized protein. (69 aa)
	ENSSLDP00000020758	Phosphatase and actin regulator. (145 aa)
	mthfr	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (661 aa)
	glmn	Glomulin, FKBP associated protein a. (599 aa)
	nog	Noggin; Belongs to the noggin family. (227 aa)
	LOC111646207	Lysine (K)-specific demethylase 6A, like. (1515 aa)
	kdm6a	Lysine (K)-specific demethylase 6A. (1382 aa)
	ENSSLDP00000023772	Phosphatase and actin regulator. (140 aa)
	ENSSLDP00000023793	Phosphatase and actin regulator. (97 aa)
	LOC111660081	Phosphatase and actin regulator 4a. (1085 aa)
	ENSSLDP00000025930	DEAF1 transcription factor. (452 aa)
	ENSSLDP00000026256	Dishevelled segment polarity protein 3a. (370 aa)
	ENSSLDP00000026265	Uncharacterized protein. (218 aa)
	ENSSLDP00000026268	DIX domain-containing protein. (54 aa)
	LOC111655285	Uncharacterized protein. (340 aa)
	bcl10	BCL10 immune signaling adaptor. (248 aa)
	dvl2	Dishevelled segment polarity protein 2. (767 aa)
	ENSSLDP00000028400	Uncharacterized protein. (287 aa)
	Ccdc85b	Coiled-coil domain containing 85B. (196 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	dvl1	Dishevelled segment polarity protein 1a. (699 aa)
	PTK7	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1048 aa)
	ENSSLDP00000031719	DIX domain-containing protein. (55 aa)
	TSC2	TSC complex subunit 2. (1087 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS4	ENSSLDP00000028400	ENSSLDP00000000620	ENSSLDP00000028400	Bardet-Biedl syndrome 4.	Uncharacterized protein.	0.402
BBS4	tsc1	ENSSLDP00000000620	ENSSLDP00000017467	Bardet-Biedl syndrome 4.	TSC complex subunit 1b.	0.402
ENSSLDP00000008120	LOC111655285	ENSSLDP00000008120	ENSSLDP00000026790	Uncharacterized protein.	Uncharacterized protein.	0.456
ENSSLDP00000008120	PTK7	ENSSLDP00000008120	ENSSLDP00000031580	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.422
ENSSLDP00000008120	sfrp2	ENSSLDP00000008120	ENSSLDP00000030675	Uncharacterized protein.	Secreted frizzled-related protein 2.	0.456
ENSSLDP00000026256	LOC111655285	ENSSLDP00000026256	ENSSLDP00000026790	Dishevelled segment polarity protein 3a.	Uncharacterized protein.	0.456
ENSSLDP00000026256	PTK7	ENSSLDP00000026256	ENSSLDP00000031580	Dishevelled segment polarity protein 3a.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.422
ENSSLDP00000026256	sfrp2	ENSSLDP00000026256	ENSSLDP00000030675	Dishevelled segment polarity protein 3a.	Secreted frizzled-related protein 2.	0.456
ENSSLDP00000026265	Hectd1	ENSSLDP00000026265	ENSSLDP00000018946	Uncharacterized protein.	Uncharacterized protein.	0.920
ENSSLDP00000026268	ENSSLDP00000031719	ENSSLDP00000026268	ENSSLDP00000031719	DIX domain-containing protein.	DIX domain-containing protein.	0.901
ENSSLDP00000026268	LOC111655285	ENSSLDP00000026268	ENSSLDP00000026790	DIX domain-containing protein.	Uncharacterized protein.	0.456
ENSSLDP00000026268	PTK7	ENSSLDP00000026268	ENSSLDP00000031580	DIX domain-containing protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.422
ENSSLDP00000026268	dvl2	ENSSLDP00000026268	ENSSLDP00000027507	DIX domain-containing protein.	Dishevelled segment polarity protein 2.	0.910
ENSSLDP00000026268	sfrp2	ENSSLDP00000026268	ENSSLDP00000030675	DIX domain-containing protein.	Secreted frizzled-related protein 2.	0.456
ENSSLDP00000028400	BBS4	ENSSLDP00000028400	ENSSLDP00000000620	Uncharacterized protein.	Bardet-Biedl syndrome 4.	0.402
ENSSLDP00000028400	LOC111646207	ENSSLDP00000028400	ENSSLDP00000021682	Uncharacterized protein.	Lysine (K)-specific demethylase 6A, like.	0.752
ENSSLDP00000028400	LOC111651813	ENSSLDP00000028400	ENSSLDP00000012664	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.402
ENSSLDP00000028400	TSC2	ENSSLDP00000028400	ENSSLDP00000032775	Uncharacterized protein.	TSC complex subunit 2.	0.994
ENSSLDP00000028400	kdm6a	ENSSLDP00000028400	ENSSLDP00000022066	Uncharacterized protein.	Lysine (K)-specific demethylase 6A.	0.752
ENSSLDP00000028400	tsc1	ENSSLDP00000028400	ENSSLDP00000017467	Uncharacterized protein.	TSC complex subunit 1b.	0.901