29 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Scfd1	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (213 aa)
	map6	Microtubule-associated protein 6a. (411 aa)
	trappc3	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
	LOC111651223	ER lumen protein-retaining receptor. (179 aa)
	fktn	Fukutin. (448 aa)
	LOC111661115	Trafficking protein particle complex 6b-like. (163 aa)
	ENSSLDP00000010650	Uncharacterized protein. (76 aa)
	golga2	Golgin A2. (1087 aa)
	trip11	Thyroid hormone receptor interactor 11. (1963 aa)
	VPS13B	Vacuolar protein sorting 13 homolog B. (4048 aa)
	LOC111652146	Microtubule-associated protein 6b. (400 aa)
	LOC111649387	Pericentrin. (3471 aa)
	LOC111654450	MAP6 domain containing 1. (313 aa)
	akap9	A-kinase anchoring protein 9. (4118 aa)
	LOC111647484	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (244 aa)
	gosr1	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (248 aa)
	gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1772 aa)
	LOC111652292	ER lumen protein-retaining receptor. (212 aa)
	mppe1	Metallophosphoesterase 1. (394 aa)
	rab30	RAB30, member RAS oncogene family. (203 aa)
	KDELR2	ER lumen protein-retaining receptor. (212 aa)
	b3gat3	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (332 aa)
	trappc6b	Trafficking protein particle complex 6b. (158 aa)
	kdelr3	ER lumen protein-retaining receptor. (215 aa)
	ENSSLDP00000001503	Uncharacterized protein. (260 aa)
	Retreg1	Reticulophagy regulator 1. (360 aa)
	lrpap1	Low density lipoprotein receptor-related protein associated protein 1. (347 aa)
	RAB29	RAB29, member RAS oncogene family. (207 aa)
	ubxn2a	UBX domain protein 2A. (249 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000001503	ENSSLDP00000010650	ENSSLDP00000001503	ENSSLDP00000010650	Uncharacterized protein.	Uncharacterized protein.	0.755
ENSSLDP00000001503	LOC111647484	ENSSLDP00000001503	ENSSLDP00000020532	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.755
ENSSLDP00000001503	Scfd1	ENSSLDP00000001503	ENSSLDP00000005592	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.763
ENSSLDP00000001503	gosr1	ENSSLDP00000001503	ENSSLDP00000021382	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.765
ENSSLDP00000001503	rab30	ENSSLDP00000001503	ENSSLDP00000029180	Uncharacterized protein.	RAB30, member RAS oncogene family.	0.763
ENSSLDP00000001503	trappc3	ENSSLDP00000001503	ENSSLDP00000008256	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.613
ENSSLDP00000010650	ENSSLDP00000001503	ENSSLDP00000010650	ENSSLDP00000001503	Uncharacterized protein.	Uncharacterized protein.	0.755
ENSSLDP00000010650	Scfd1	ENSSLDP00000010650	ENSSLDP00000005592	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.909
ENSSLDP00000010650	golga2	ENSSLDP00000010650	ENSSLDP00000010911	Uncharacterized protein.	Golgin A2.	0.919
ENSSLDP00000010650	trip11	ENSSLDP00000010650	ENSSLDP00000012427	Uncharacterized protein.	Thyroid hormone receptor interactor 11.	0.414
KDELR2	gbf1	ENSSLDP00000029341	ENSSLDP00000022336	ER lumen protein-retaining receptor.	Golgi brefeldin A resistant guanine nucleotide exchange factor 1.	0.698
LOC111647484	ENSSLDP00000001503	ENSSLDP00000020532	ENSSLDP00000001503	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein.	0.755
LOC111647484	Scfd1	ENSSLDP00000020532	ENSSLDP00000005592	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.909
LOC111647484	golga2	ENSSLDP00000020532	ENSSLDP00000010911	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Golgin A2.	0.919
LOC111647484	gosr1	ENSSLDP00000020532	ENSSLDP00000021382	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.901
LOC111647484	trip11	ENSSLDP00000020532	ENSSLDP00000012427	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Thyroid hormone receptor interactor 11.	0.414
LOC111649387	golga2	ENSSLDP00000018496	ENSSLDP00000010911	Pericentrin.	Golgin A2.	0.605
LOC111651223	gbf1	ENSSLDP00000009486	ENSSLDP00000022336	ER lumen protein-retaining receptor.	Golgi brefeldin A resistant guanine nucleotide exchange factor 1.	0.698
LOC111652292	gbf1	ENSSLDP00000024157	ENSSLDP00000022336	ER lumen protein-retaining receptor.	Golgi brefeldin A resistant guanine nucleotide exchange factor 1.	0.698
LOC111661115	Scfd1	ENSSLDP00000010620	ENSSLDP00000005592	Trafficking protein particle complex 6b-like.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.638