STRINGSTRING
prodh2 prodh2 LOC111666733 LOC111666733 LOC111664813 LOC111664813 pycr3 pycr3 LOC111663083 LOC111663083 LOC111657077 LOC111657077 tmed8 tmed8 noxred1 noxred1 LOC111657718 LOC111657718 aldh4a1 aldh4a1 ALDH18A1 ALDH18A1 oat oat dao dao
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prodh2Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (459 aa)
LOC111666733Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (324 aa)
LOC111664813Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (622 aa)
pycr3Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (280 aa)
LOC111663083Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (661 aa)
LOC111657077Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (782 aa)
tmed8Transmembrane p24 trafficking protein 8. (269 aa)
noxred1NADP-dependent oxidoreductase domain containing 1. (302 aa)
LOC111657718Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (321 aa)
aldh4a1Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (556 aa)
ALDH18A1Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (779 aa)
oatOrnithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
daoD-amino-acid oxidase, tandem duplicate 2. (345 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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