STRINGSTRING
LOC111666869 LOC111666869 LOC111656677 LOC111656677 ssrp1 ssrp1 wdr61 wdr61 LOC111670156 LOC111670156 ENSSLDP00000002558 ENSSLDP00000002558 paf1 paf1 cdk12 cdk12 LOC111667587 LOC111667587 LOC111654870 LOC111654870 LOC111659175 LOC111659175 tonsl tonsl ccnk ccnk ccnt1 ccnt1 ENSSLDP00000005176 ENSSLDP00000005176 LOC111646012 LOC111646012 nelfcd nelfcd nelfa nelfa mllt1 mllt1 ENSSLDP00000008130 ENSSLDP00000008130 LOC111656821 LOC111656821 eloc eloc aff4 aff4 supt5h supt5h eaf2 eaf2 supt16h supt16h ENSSLDP00000010710 ENSSLDP00000010710 nelfb nelfb ENSSLDP00000012247 ENSSLDP00000012247 rtf1 rtf1 leo1 leo1 CCNK CCNK pex2 pex2 ENSSLDP00000014037 ENSSLDP00000014037 LOC111655108 LOC111655108 ENSSLDP00000017093 ENSSLDP00000017093 eaf1 eaf1 mllt3 mllt3 supt6h supt6h ENSSLDP00000019420 ENSSLDP00000019420 ercc6 ercc6 ENSSLDP00000021197 ENSSLDP00000021197 ELOF1 ELOF1 rb1 rb1 LOC111650957 LOC111650957 LOC111660587 LOC111660587 ell2 ell2 LOC111652268 LOC111652268 ENSSLDP00000023118 ENSSLDP00000023118 ell ell ENSSLDP00000023671 ENSSLDP00000023671 Eloa Eloa cdc73 cdc73 supt4h1 supt4h1 cdk13 cdk13 LOC111672385 LOC111672385 LOC111671085 LOC111671085 LOC111667384 LOC111667384 ctr9 ctr9 nelfe nelfe LOC111667059 LOC111667059 elp4 elp4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111666869Si:ch211-13k12.2. (599 aa)
LOC111656677Elongin A, like. (580 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (702 aa)
wdr61WD repeat domain 61. (305 aa)
LOC111670156Uncharacterized protein. (622 aa)
ENSSLDP00000002558Protein kinase domain-containing protein. (298 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (525 aa)
cdk12Cyclin-dependent kinase 12. (1360 aa)
LOC111667587Thioredoxin_11 domain-containing protein. (479 aa)
LOC111654870Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (546 aa)
LOC111659175Uncharacterized protein. (610 aa)
tonslTonsoku-like, DNA repair protein. (1446 aa)
ccnkCyclin K; Belongs to the cyclin family. (553 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (696 aa)
ENSSLDP00000005176AIG1-type G domain-containing protein. (416 aa)
LOC111646012Cyclin T2b; Belongs to the cyclin family. (553 aa)
nelfcdNegative elongation factor complex member C/D. (579 aa)
nelfaNegative elongation factor complex member A. (547 aa)
mllt1MLLT1 super elongation complex subunit a. (593 aa)
ENSSLDP00000008130WD_REPEATS_REGION domain-containing protein. (160 aa)
LOC111656821Uncharacterized protein. (1206 aa)
elocElongin C paralog a; Belongs to the SKP1 family. (112 aa)
aff4AF4/FMR2 family, member 4. (1155 aa)
supt5hTranscription elongation factor SPT5. (1084 aa)
eaf2ELL associated factor 2. (266 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1031 aa)
ENSSLDP00000010710Thioredoxin_11 domain-containing protein. (439 aa)
nelfbNegative elongation factor complex member B. (583 aa)
ENSSLDP00000012247Ubiquitin-like domain-containing protein. (101 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (636 aa)
CCNKCyclin K; Belongs to the cyclin family. (478 aa)
pex2Peroxisomal biogenesis factor 2. (331 aa)
ENSSLDP00000014037Uncharacterized protein. (302 aa)
LOC111655108B30.2/SPRY domain-containing protein. (705 aa)
ENSSLDP00000017093Thioredoxin_11 domain-containing protein. (514 aa)
eaf1ELL associated factor 1. (259 aa)
mllt3MLLT3 super elongation complex subunit. (540 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1649 aa)
ENSSLDP00000019420EAF domain-containing protein. (80 aa)
ercc6Excision repair cross-complementation group 6. (1394 aa)
ENSSLDP00000021197Thioredoxin_11 domain-containing protein. (599 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
rb1Retinoblastoma 1. (914 aa)
LOC111650957Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
LOC111660587Elongin B. (119 aa)
ell2Elongation factor, RNA polymerase II, 2. (626 aa)
LOC111652268Ubiquitin-like domain-containing protein. (120 aa)
ENSSLDP00000023118Septin-type G domain-containing protein. (244 aa)
ellElongation factor RNA polymerase II. (564 aa)
ENSSLDP00000023671PRY domain-containing protein. (484 aa)
EloaElongin A. (219 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
cdk13Cyclin-dependent kinase 13. (1419 aa)
LOC111672385C2H2-type domain-containing protein. (599 aa)
LOC111671085Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (543 aa)
LOC111667384Cyclin T2; Belongs to the cyclin family. (712 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1163 aa)
nelfeNegative elongation factor complex member E. (344 aa)
LOC111667059Interactor of little elongator complex ELL subunit 2. (944 aa)
elp4Elongator acetyltransferase complex subunit 4. (408 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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