25 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DDAH1	Dimethylarginine dimethylaminohydrolase 1. (282 aa)
	adhfe1	Alcohol dehydrogenase iron containing 1. (466 aa)
	LOC111644964	Glutamic-oxaloacetic transaminase 1 like 1. (420 aa)
	LOC111655005	Glutaminase 2a (liver, mitochondrial). (609 aa)
	prodh2	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (459 aa)
	LOC111670607	Uncharacterized protein; Belongs to the arginase family. (174 aa)
	arg2	Arginase. (349 aa)
	fah	Fumarylacetoacetase. (418 aa)
	LOC111655096	Glutaminase 2b (liver, mitochondrial). (598 aa)
	LOC111664813	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (622 aa)
	GOT1	Aspartate aminotransferase. (410 aa)
	LOC111667432	EF-hand_14 domain-containing protein. (572 aa)
	nos1	Nitric oxide synthase; Produces nitric oxide (NO). (1428 aa)
	arg1	Arginase. (303 aa)
	LOC111663083	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (661 aa)
	got1	Aspartate aminotransferase. (410 aa)
	asrgl1	Asparaginase like 1. (309 aa)
	LOC111658916	Si:dkey-103j14.5. (310 aa)
	LOC111646375	Si:ch211-256m1.8. (1579 aa)
	LOC111672443	Glutaminase a. (634 aa)
	gad2	Glutamate decarboxylase 2. (514 aa)
	aldh4a1	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (556 aa)
	LOC111651737	Dimethylarginine dimethylaminohydrolase 2. (290 aa)
	oat	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
	dao	D-amino-acid oxidase, tandem duplicate 2. (345 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDAH1	oat	ENSSLDP00000001540	ENSSLDP00000032087	Dimethylarginine dimethylaminohydrolase 1.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.551
GOT1	LOC111644964	ENSSLDP00000016094	ENSSLDP00000011421	Aspartate aminotransferase.	Glutamic-oxaloacetic transaminase 1 like 1.	0.905
GOT1	LOC111646375	ENSSLDP00000016094	ENSSLDP00000026150	Aspartate aminotransferase.	Si:ch211-256m1.8.	0.920
GOT1	LOC111658916	ENSSLDP00000016094	ENSSLDP00000024876	Aspartate aminotransferase.	Si:dkey-103j14.5.	0.920
GOT1	aldh4a1	ENSSLDP00000016094	ENSSLDP00000028420	Aspartate aminotransferase.	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.953
GOT1	fah	ENSSLDP00000016094	ENSSLDP00000013622	Aspartate aminotransferase.	Fumarylacetoacetase.	0.424
GOT1	gad2	ENSSLDP00000016094	ENSSLDP00000027117	Aspartate aminotransferase.	Glutamate decarboxylase 2.	0.821
GOT1	got1	ENSSLDP00000016094	ENSSLDP00000024766	Aspartate aminotransferase.	Aspartate aminotransferase.	0.900
GOT1	oat	ENSSLDP00000016094	ENSSLDP00000032087	Aspartate aminotransferase.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.459
LOC111644964	GOT1	ENSSLDP00000011421	ENSSLDP00000016094	Glutamic-oxaloacetic transaminase 1 like 1.	Aspartate aminotransferase.	0.905
LOC111644964	LOC111646375	ENSSLDP00000011421	ENSSLDP00000026150	Glutamic-oxaloacetic transaminase 1 like 1.	Si:ch211-256m1.8.	0.920
LOC111644964	LOC111658916	ENSSLDP00000011421	ENSSLDP00000024876	Glutamic-oxaloacetic transaminase 1 like 1.	Si:dkey-103j14.5.	0.920
LOC111644964	aldh4a1	ENSSLDP00000011421	ENSSLDP00000028420	Glutamic-oxaloacetic transaminase 1 like 1.	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.953
LOC111644964	fah	ENSSLDP00000011421	ENSSLDP00000013622	Glutamic-oxaloacetic transaminase 1 like 1.	Fumarylacetoacetase.	0.424
LOC111644964	gad2	ENSSLDP00000011421	ENSSLDP00000027117	Glutamic-oxaloacetic transaminase 1 like 1.	Glutamate decarboxylase 2.	0.821
LOC111644964	got1	ENSSLDP00000011421	ENSSLDP00000024766	Glutamic-oxaloacetic transaminase 1 like 1.	Aspartate aminotransferase.	0.905
LOC111644964	oat	ENSSLDP00000011421	ENSSLDP00000032087	Glutamic-oxaloacetic transaminase 1 like 1.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.459
LOC111646375	GOT1	ENSSLDP00000026150	ENSSLDP00000016094	Si:ch211-256m1.8.	Aspartate aminotransferase.	0.920
LOC111646375	LOC111644964	ENSSLDP00000026150	ENSSLDP00000011421	Si:ch211-256m1.8.	Glutamic-oxaloacetic transaminase 1 like 1.	0.920
LOC111646375	LOC111658916	ENSSLDP00000026150	ENSSLDP00000024876	Si:ch211-256m1.8.	Si:dkey-103j14.5.	0.901