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taf3 taf3 mnat1 mnat1 recql5 recql5 wdr61 wdr61 polr2g polr2g paf1 paf1 polr2h polr2h taf12 taf12 LOC111667587 LOC111667587 taf9 taf9 polr2c polr2c gtf2a1 gtf2a1 ENSSLDP00000005176 ENSSLDP00000005176 LOC111644792 LOC111644792 LOC111656197 LOC111656197 taf8 taf8 trrap trrap POLR2E POLR2E ENSSLDP00000008130 ENSSLDP00000008130 ENSSLDP00000008454 ENSSLDP00000008454 taf11 taf11 ENSSLDP00000010710 ENSSLDP00000010710 gtf2f1 gtf2f1 ercc3 ercc3 gtf2f2 gtf2f2 polr2i polr2i rtf1 rtf1 taf5 taf5 LOC111647896 LOC111647896 rprd1a rprd1a leo1 leo1 pex2 pex2 LOC111670993 LOC111670993 ENSSLDP00000015085 ENSSLDP00000015085 taf6l taf6l polr2m polr2m LOC111655108 LOC111655108 ENSSLDP00000017093 ENSSLDP00000017093 LOC111657619 LOC111657619 polr2k polr2k LOC111647417 LOC111647417 gtf2a2 gtf2a2 taf4 taf4 LOC111652165 LOC111652165 ENSSLDP00000020317 ENSSLDP00000020317 taf13 taf13 gtf2b gtf2b rpap2 rpap2 ENSSLDP00000021197 ENSSLDP00000021197 LOC111653959 LOC111653959 taf5l taf5l polr2b polr2b LOC111672326 LOC111672326 ENSSLDP00000021689 ENSSLDP00000021689 ccnh ccnh supt3h supt3h ENSSLDP00000023118 ENSSLDP00000023118 gtf2h3 gtf2h3 ENSSLDP00000023671 ENSSLDP00000023671 cdc73 cdc73 gtf2h5 gtf2h5 ercc2 ercc2 polr2a polr2a taf6 taf6 taf7 taf7 gtf2a1l gtf2a1l myo6 myo6 ctr9 ctr9 gtf2e1 gtf2e1 polr2j polr2j LOC111652387 LOC111652387 taf2 taf2 gtf2h1 gtf2h1 rprd1b rprd1b polr2l polr2l tbp tbp taf10 taf10 polr2d polr2d gtf2e2 gtf2e2 polr2f polr2f
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
mnat1MNAT1 component of CDK activating kinase. (236 aa)
recql5RecQ helicase-like 5. (1022 aa)
wdr61WD repeat domain 61. (305 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (525 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (153 aa)
LOC111667587Thioredoxin_11 domain-containing protein. (479 aa)
taf9TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
gtf2a1General transcription factor IIA, 1. (351 aa)
ENSSLDP00000005176AIG1-type G domain-containing protein. (416 aa)
LOC111644792Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1219 aa)
LOC111656197Uncharacterized protein. (203 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (308 aa)
trrapTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3843 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSSLDP00000008130WD_REPEATS_REGION domain-containing protein. (160 aa)
ENSSLDP00000008454PH_TFIIH domain-containing protein. (61 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (205 aa)
ENSSLDP00000010710Thioredoxin_11 domain-containing protein. (439 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
ercc3Excision repair cross-complementation group 3. (803 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
LOC111647896General transcription factor IIH subunit. (392 aa)
rprd1aRegulation of nuclear pre-mRNA domain containing 1A. (294 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (636 aa)
pex2Peroxisomal biogenesis factor 2. (331 aa)
LOC111670993TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (881 aa)
ENSSLDP00000015085TAF4 domain-containing protein. (274 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (627 aa)
polr2mRNA polymerase II subunit M. (358 aa)
LOC111655108B30.2/SPRY domain-containing protein. (705 aa)
ENSSLDP00000017093Thioredoxin_11 domain-containing protein. (514 aa)
LOC111657619Regulation of nuclear pre-mRNA domain containing 2a. (1069 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC111647417Si:dkey-219c3.2. (900 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
taf4TATA-box binding protein associated factor 4. (996 aa)
LOC111652165Regulation of nuclear pre-mRNA domain containing 2b. (1194 aa)
ENSSLDP00000020317General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (427 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
rpap2RNA polymerase II associated protein 2. (679 aa)
ENSSLDP00000021197Thioredoxin_11 domain-containing protein. (599 aa)
LOC111653959Transcription initiation factor TFIID subunit. (1990 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC111672326TAFH domain-containing protein. (942 aa)
ENSSLDP00000021689Uncharacterized protein. (167 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (339 aa)
ENSSLDP00000023118Septin-type G domain-containing protein. (244 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (278 aa)
ENSSLDP00000023671PRY domain-containing protein. (484 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (421 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (373 aa)
myo6Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1213 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1163 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (444 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC111652387General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1213 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
tbpTATA box binding protein. (253 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (284 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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