17 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111668907	Fe2OG dioxygenase domain-containing protein. (506 aa)
	LOC111649729	Egl-9 family hypoxia-inducible factor 3. (242 aa)
	EGLN3	Egl nine homolog 3-like. (85 aa)
	LOC111653709	Zgc:103625. (205 aa)
	ENSSLDP00000007854	Uncharacterized protein. (172 aa)
	p4ha2	Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2. (556 aa)
	ENSSLDP00000011088	Uncharacterized protein. (150 aa)
	mettl26	Methyltransferase like 26. (206 aa)
	p4ha3	Prolyl 4-hydroxylase, alpha polypeptide III. (542 aa)
	P4HTM	Prolyl 4-hydroxylase, transmembrane. (303 aa)
	p4ha1	Prolyl 4-hydroxylase, alpha polypeptide I b. (548 aa)
	LOC111664374	Fe2OG dioxygenase domain-containing protein. (453 aa)
	ENSSLDP00000022875	Fe2OG dioxygenase domain-containing protein. (101 aa)
	LOC111666256	Peroxiredoxin 4. (272 aa)
	LOC111655980	Egl-9 family hypoxia-inducible factor 2. (553 aa)
	LOC111660840	Prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum). (494 aa)
	egln1	Egl-9 family hypoxia-inducible factor 1a. (359 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGLN3	ENSSLDP00000011088	ENSSLDP00000003010	ENSSLDP00000011088	Egl nine homolog 3-like.	Uncharacterized protein.	0.444
ENSSLDP00000011088	EGLN3	ENSSLDP00000011088	ENSSLDP00000003010	Uncharacterized protein.	Egl nine homolog 3-like.	0.444
p4ha1	p4ha2	ENSSLDP00000020791	ENSSLDP00000010963	Prolyl 4-hydroxylase, alpha polypeptide I b.	Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.	0.901
p4ha1	p4ha3	ENSSLDP00000020791	ENSSLDP00000012734	Prolyl 4-hydroxylase, alpha polypeptide I b.	Prolyl 4-hydroxylase, alpha polypeptide III.	0.910
p4ha2	p4ha1	ENSSLDP00000010963	ENSSLDP00000020791	Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.	Prolyl 4-hydroxylase, alpha polypeptide I b.	0.901
p4ha2	p4ha3	ENSSLDP00000010963	ENSSLDP00000012734	Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.	Prolyl 4-hydroxylase, alpha polypeptide III.	0.910
p4ha3	p4ha1	ENSSLDP00000012734	ENSSLDP00000020791	Prolyl 4-hydroxylase, alpha polypeptide III.	Prolyl 4-hydroxylase, alpha polypeptide I b.	0.910
p4ha3	p4ha2	ENSSLDP00000012734	ENSSLDP00000010963	Prolyl 4-hydroxylase, alpha polypeptide III.	Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.	0.910