19 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSLDP00000006566	BRCA2 DNA repair associated. (2740 aa)
	ENSSLDP00000002205	Uncharacterized protein. (83 aa)
	rad51	RAD51 recombinase; Belongs to the RecA family. (170 aa)
	gins1	GINS complex subunit 1 (Psf1 homolog). (196 aa)
	mcm6	DNA helicase; Belongs to the MCM family. (816 aa)
	cdc45	CDC45 cell division cycle 45 homolog (S. cerevisiae). (569 aa)
	LOC111651913	Rad51 domain-containing protein. (169 aa)
	gins3	GINS complex subunit 3. (211 aa)
	lig1	DNA ligase. (1018 aa)
	mcm2	DNA helicase; Belongs to the MCM family. (888 aa)
	pola1	DNA polymerase. (1371 aa)
	ZNF830	Zinc finger protein 830. (346 aa)
	mcm4	DNA helicase; Belongs to the MCM family. (907 aa)
	gmnn	Geminin DNA replication inhibitor. (233 aa)
	DONSON	Downstream neighbor of SON. (540 aa)
	ENSSLDP00000021278	ATPase family AAA domain containing 5b. (887 aa)
	cdt1	Chromatin licensing and DNA replication factor 1. (610 aa)
	mcm3	DNA helicase; Belongs to the MCM family. (815 aa)
	atad5	ATPase family AAA domain containing 5a. (1693 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DONSON	cdc45	ENSSLDP00000018869	ENSSLDP00000006206	Downstream neighbor of SON.	CDC45 cell division cycle 45 homolog (S. cerevisiae).	0.600
DONSON	cdt1	ENSSLDP00000018869	ENSSLDP00000023234	Downstream neighbor of SON.	Chromatin licensing and DNA replication factor 1.	0.467
DONSON	mcm2	ENSSLDP00000018869	ENSSLDP00000008653	Downstream neighbor of SON.	DNA helicase; Belongs to the MCM family.	0.752
DONSON	mcm3	ENSSLDP00000018869	ENSSLDP00000025695	Downstream neighbor of SON.	DNA helicase; Belongs to the MCM family.	0.588
DONSON	mcm4	ENSSLDP00000018869	ENSSLDP00000016125	Downstream neighbor of SON.	DNA helicase; Belongs to the MCM family.	0.623
DONSON	mcm6	ENSSLDP00000018869	ENSSLDP00000005466	Downstream neighbor of SON.	DNA helicase; Belongs to the MCM family.	0.534
ENSSLDP00000002205	ENSSLDP00000006566	ENSSLDP00000002205	ENSSLDP00000006566	Uncharacterized protein.	BRCA2 DNA repair associated.	0.968
ENSSLDP00000002205	ENSSLDP00000021278	ENSSLDP00000002205	ENSSLDP00000021278	Uncharacterized protein.	ATPase family AAA domain containing 5b.	0.781
ENSSLDP00000002205	atad5	ENSSLDP00000002205	ENSSLDP00000033500	Uncharacterized protein.	ATPase family AAA domain containing 5a.	0.781
ENSSLDP00000002205	cdc45	ENSSLDP00000002205	ENSSLDP00000006206	Uncharacterized protein.	CDC45 cell division cycle 45 homolog (S. cerevisiae).	0.765
ENSSLDP00000002205	cdt1	ENSSLDP00000002205	ENSSLDP00000023234	Uncharacterized protein.	Chromatin licensing and DNA replication factor 1.	0.532
ENSSLDP00000002205	gins1	ENSSLDP00000002205	ENSSLDP00000004659	Uncharacterized protein.	GINS complex subunit 1 (Psf1 homolog).	0.435
ENSSLDP00000002205	lig1	ENSSLDP00000002205	ENSSLDP00000008249	Uncharacterized protein.	DNA ligase.	0.621
ENSSLDP00000002205	mcm2	ENSSLDP00000002205	ENSSLDP00000008653	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.713
ENSSLDP00000002205	mcm3	ENSSLDP00000002205	ENSSLDP00000025695	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.562
ENSSLDP00000002205	mcm4	ENSSLDP00000002205	ENSSLDP00000016125	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.714
ENSSLDP00000002205	mcm6	ENSSLDP00000002205	ENSSLDP00000005466	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.652
ENSSLDP00000002205	pola1	ENSSLDP00000002205	ENSSLDP00000011034	Uncharacterized protein.	DNA polymerase.	0.620
ENSSLDP00000002205	rad51	ENSSLDP00000002205	ENSSLDP00000003526	Uncharacterized protein.	RAD51 recombinase; Belongs to the RecA family.	0.436
ENSSLDP00000006566	ENSSLDP00000002205	ENSSLDP00000006566	ENSSLDP00000002205	BRCA2 DNA repair associated.	Uncharacterized protein.	0.968