STRINGSTRING
taf12 taf12 ENSSLDP00000003415 ENSSLDP00000003415 rad51 rad51 ENSSLDP00000003579 ENSSLDP00000003579 ENSSLDP00000003637 ENSSLDP00000003637 ENSSLDP00000003771 ENSSLDP00000003771 cenph cenph dlgap5 dlgap5 LOC111673234 LOC111673234 cdc45 cdc45 ENSSLDP00000006497 ENSSLDP00000006497 LOC111665854 LOC111665854 rad51c rad51c LOC111653747 LOC111653747 ENSSLDP00000007384 ENSSLDP00000007384 LOC111651913 LOC111651913 ENSSLDP00000008296 ENSSLDP00000008296 LOC111663521 LOC111663521 ENSSLDP00000008616 ENSSLDP00000008616 mcm2 mcm2 Cenpp Cenpp LOC111659185 LOC111659185 ENSSLDP00000009960 ENSSLDP00000009960 taf11 taf11 ENSSLDP00000010637 ENSSLDP00000010637 rrn3 rrn3 ENSSLDP00000011023 ENSSLDP00000011023 dmc1 dmc1 ENSSLDP00000011115 ENSSLDP00000011115 LOC111669690 LOC111669690 ENSSLDP00000011487 ENSSLDP00000011487 cenpi cenpi LOC111661033 LOC111661033 oip5 oip5 cenpk cenpk taf3 taf3 LOC111661813 LOC111661813 baz1a baz1a spty2d1 spty2d1 taf6l taf6l chrac1 chrac1 gmnn gmnn LOC111658614 LOC111658614 LOC111658654 LOC111658654 LOC111653258 LOC111653258 ENSSLDP00000017353 ENSSLDP00000017353 ENSSLDP00000017515 ENSSLDP00000017515 LOC111659884 LOC111659884 LOC111668070 LOC111668070 ENSSLDP00000018995 ENSSLDP00000018995 ENSSLDP00000019243 ENSSLDP00000019243 gtf2a2 gtf2a2 brf2 brf2 taf13 taf13 naa60 naa60 gtf2b gtf2b dnajc9 dnajc9 LOC111659963 LOC111659963 LOC111653959 LOC111653959 LOC111672981 LOC111672981 kntc1 kntc1 cdt1 cdt1 Rsf1 Rsf1 cenpt cenpt LOC111652258 LOC111652258 ENSSLDP00000024161 ENSSLDP00000024161 hells hells sirt6 sirt6 cenpv cenpv daxx daxx cenpn cenpn gtf2h5 gtf2h5 nasp nasp LOC111654238 LOC111654238 LOC111654239 LOC111654239 ENSSLDP00000000573 ENSSLDP00000000573 ENSSLDP00000001760 ENSSLDP00000001760 shprh shprh ENSSLDP00000002205 ENSSLDP00000002205 H3-3B H3-3B ENSSLDP00000002841 ENSSLDP00000002841 ENSSLDP00000003246 ENSSLDP00000003246 sart3 sart3 LOC111645708 LOC111645708 ENSSLDP00000033302 ENSSLDP00000033302 dr1 dr1 NASP NASP chaf1b chaf1b taf6 taf6 taf7 taf7 LOC111657177 LOC111657177 rag2 rag2 rag1 rag1 mis18a mis18a cenpx cenpx LOC111648125 LOC111648125 ENSSLDP00000028829 ENSSLDP00000028829 grwd1 grwd1 ENSSLDP00000029229 ENSSLDP00000029229 ENSSLDP00000029282 ENSSLDP00000029282 ENSSLDP00000029429 ENSSLDP00000029429 ENSSLDP00000029488 ENSSLDP00000029488 ENSSLDP00000029509 ENSSLDP00000029509 ubtf ubtf LOC111660712 LOC111660712 LOC111651692 LOC111651692 mis12 mis12 pole3 pole3 taf10 taf10 LOC111671228 LOC111671228 LOC111654196 LOC111654196 SMYD3 SMYD3 set set polr1e polr1e
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (153 aa)
ENSSLDP00000003415Histone H3; Belongs to the histone H3 family. (131 aa)
rad51RAD51 recombinase; Belongs to the RecA family. (170 aa)
ENSSLDP00000003579Zgc:110425. (203 aa)
ENSSLDP00000003637Histone domain-containing protein. (105 aa)
ENSSLDP00000003771Histone domain-containing protein. (168 aa)
cenphCENP-H domain-containing protein. (239 aa)
dlgap5Discs, large (Drosophila) homolog-associated protein 5. (936 aa)
LOC111673234PHD-type domain-containing protein. (1699 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (569 aa)
ENSSLDP00000006497H15 domain-containing protein. (209 aa)
LOC111665854Uncharacterized protein. (400 aa)
rad51cRAD51 paralog C. (353 aa)
LOC111653747Chromatin assembly factor 1, subunit A (p150). (846 aa)
ENSSLDP00000007384Pogo transposable element derived with ZNF domain a. (1255 aa)
LOC111651913Rad51 domain-containing protein. (169 aa)
ENSSLDP00000008296Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (170 aa)
LOC111663521Histone H3.3. (136 aa)
ENSSLDP00000008616Histone H3; Belongs to the histone H3 family. (92 aa)
mcm2DNA helicase; Belongs to the MCM family. (888 aa)
CenppUncharacterized protein. (186 aa)
LOC111659185Upstream binding transcription factor, like. (514 aa)
ENSSLDP00000009960Histone H3; Belongs to the histone H3 family. (140 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (205 aa)
ENSSLDP00000010637Uncharacterized protein. (847 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (612 aa)
ENSSLDP00000011023Uncharacterized protein. (90 aa)
dmc1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (325 aa)
ENSSLDP00000011115H15 domain-containing protein. (125 aa)
LOC111669690H15 domain-containing protein. (194 aa)
ENSSLDP00000011487Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (404 aa)
cenpiCentromere protein I. (720 aa)
LOC111661033Histone domain-containing protein. (109 aa)
oip5Mis18 domain-containing protein. (178 aa)
cenpkCentromere protein K. (266 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
LOC111661813Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family. (360 aa)
baz1aUncharacterized protein. (1167 aa)
spty2d1SPT2 chromatin protein domain containing 1. (717 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (627 aa)
chrac1Chromatin accessibility complex subunit 1. (121 aa)
gmnnGeminin DNA replication inhibitor. (233 aa)
LOC111658614H1 histone family, member 0. (195 aa)
LOC111658654Histone H3.3. (136 aa)
LOC111653258Histone H2B; Belongs to the histone H2B family. (116 aa)
ENSSLDP00000017353Histone H3; Belongs to the histone H3 family. (103 aa)
ENSSLDP00000017515Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (88 aa)
LOC111659884BRF1 RNA polymerase III transcription initiation factor subunit. (697 aa)
LOC111668070SANT domain-containing protein. (2591 aa)
ENSSLDP00000018995PHD-type domain-containing protein. (720 aa)
ENSSLDP00000019243Uncharacterized protein. (65 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
brf2BRF2 RNA polymerase III transcription initiation factor subunit. (451 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
naa60N-acetyltransferase 15 (GCN5-related, putative). (242 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
dnajc9DnaJ heat shock protein family (Hsp40) member C9. (252 aa)
LOC111659963H2A histone family, member Y; Belongs to the histone H2A family. (369 aa)
LOC111653959Transcription initiation factor TFIID subunit. (1990 aa)
LOC111672981Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (370 aa)
kntc1Kinetochore associated 1. (1901 aa)
cdt1Chromatin licensing and DNA replication factor 1. (610 aa)
Rsf1Uncharacterized protein. (106 aa)
cenptCENP-T_C domain-containing protein. (879 aa)
LOC111652258Uncharacterized protein. (571 aa)
ENSSLDP00000024161Heterochromatin protein 1, binding protein 3. (569 aa)
hellsHelicase, lymphoid specific. (853 aa)
sirt6Sirtuin 6. (323 aa)
cenpvCentromere protein V. (124 aa)
daxxDeath-domain associated protein. (748 aa)
cenpnCentromere protein N. (345 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
naspNuclear autoantigenic sperm protein (histone-binding). (427 aa)
LOC111654238Histone H3; Belongs to the histone H3 family. (136 aa)
LOC111654239Histone H3.3. (136 aa)
ENSSLDP00000000573BRF1 RNA polymerase III transcription initiation factor subunit b. (728 aa)
ENSSLDP00000001760Pogo transposable element derived with ZNF domain b. (1680 aa)
shprhSNF2 histone linker PHD RING helicase. (1596 aa)
ENSSLDP00000002205Uncharacterized protein. (83 aa)
H3-3BHistone H3.3. (136 aa)
ENSSLDP00000002841H15 domain-containing protein. (155 aa)
ENSSLDP00000003246WD_REPEATS_REGION domain-containing protein. (114 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (1021 aa)
LOC111645708Si:ch211-103n10.5. (187 aa)
ENSSLDP00000033302Uncharacterized protein. (75 aa)
dr1Down-regulator of transcription 1. (176 aa)
NASPNuclear autoantigenic sperm protein. (519 aa)
chaf1bChromatin assembly factor 1, subunit B. (617 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (421 aa)
LOC111657177J domain-containing protein. (214 aa)
rag2Recombination activating gene 2. (533 aa)
rag1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1071 aa)
mis18aMIS18 kinetochore protein A. (225 aa)
cenpxCentromere protein X. (89 aa)
LOC111648125SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family. (279 aa)
ENSSLDP00000028829Histone H2B; Belongs to the histone H2B family. (63 aa)
grwd1Glutamate-rich WD repeat containing 1. (453 aa)
ENSSLDP00000029229Histone H3; Belongs to the histone H3 family. (106 aa)
ENSSLDP00000029282Histone domain-containing protein. (196 aa)
ENSSLDP00000029429Histone H3; Belongs to the histone H3 family. (101 aa)
ENSSLDP00000029488H15 domain-containing protein. (145 aa)
ENSSLDP00000029509Histone H2B; Belongs to the histone H2B family. (63 aa)
ubtfUpstream binding transcription factor. (737 aa)
LOC111660712Linker histone H1M. (247 aa)
LOC111651692Histone domain-containing protein. (131 aa)
mis12MIS12 kinetochore complex component. (229 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (146 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
LOC111671228RAD52 homolog, DNA repair protein. (430 aa)
LOC111654196Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family. (558 aa)
SMYD3SET and MYND domain containing 3. (438 aa)
setUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (268 aa)
polr1eRNA polymerase I subunit E. (420 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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