STRINGSTRING
nfatc2 nfatc2 mnat1 mnat1 trip4 trip4 LOC111671973 LOC111671973 LOC111667811 LOC111667811 LOC111656011 LOC111656011 LOC111653651 LOC111653651 HAND1 HAND1 LOC111671359 LOC111671359 pou2af1 pou2af1 LOC111653033 LOC111653033 LOC111654356 LOC111654356 LOC111667693 LOC111667693 LOC111667645 LOC111667645 LOC111644705 LOC111644705 nfya nfya taf12 taf12 taf9 taf9 med18 med18 Cebpa Cebpa ENSSLDP00000004146 ENSSLDP00000004146 LOC111668433 LOC111668433 LOC111664669 LOC111664669 LOC111668928 LOC111668928 gtf2a1 gtf2a1 LOC111656197 LOC111656197 taf8 taf8 LOC111658510 LOC111658510 trrap trrap Ascl1 Ascl1 LOC111671419 LOC111671419 LOC111661182 LOC111661182 LOC111648020 LOC111648020 LOC111647417 LOC111647417 cbfb cbfb LOC111653955 LOC111653955 pygo2 pygo2 stat4 stat4 xbp1 xbp1 gtf2a2 gtf2a2 ENSSLDP00000020317 ENSSLDP00000020317 LOC111661970 LOC111661970 fosl2 fosl2 taf13 taf13 LOC111656331 LOC111656331 atf6 atf6 gtf2b gtf2b LOC111653959 LOC111653959 taf5l taf5l LOC111648134 LOC111648134 LOC111672326 LOC111672326 ENSSLDP00000021689 ENSSLDP00000021689 rb1 rb1 LOC111664345 LOC111664345 drap1 drap1 tcf7 tcf7 ccnh ccnh ARNTL2 ARNTL2 supt3h supt3h gtf2h3 gtf2h3 tfdp1 tfdp1 bach2 bach2 med31 med31 LOC111646255 LOC111646255 atf2 atf2 med6 med6 LOC111653909 LOC111653909 LOC111645167 LOC111645167 nfe2l2 nfe2l2 med1 med1 e2f1 e2f1 tcf7l2 tcf7l2 e2f2 e2f2 med8 med8 dr1 dr1 gtf2h5 gtf2h5 atf6b atf6b ercc2 ercc2 LOC111672441 LOC111672441 taf6 taf6 med4 med4 LOC111671132 LOC111671132 LOC111652301 LOC111652301 taf7 taf7 LOC111663204 LOC111663204 cebpz cebpz LOC111671129 LOC111671129 rxra rxra gtf2a1l gtf2a1l LOC111671828 LOC111671828 med9 med9 NR5A1 NR5A1 LOC111652339 LOC111652339 LOC111657772 LOC111657772 E2F3 E2F3 gtf2e1 gtf2e1 MAX MAX ASCL5 ASCL5 LOC111652387 LOC111652387 taf2 taf2 gtf2h1 gtf2h1 LOC111669870 LOC111669870 LOC111646480 LOC111646480 LOC111655341 LOC111655341 LOC111673158 LOC111673158 fosl1 fosl1 med14 med14 smad9 smad9 rfxap rfxap LOC111664452 LOC111664452 max max lef1 lef1 smad3 smad3 smad6 smad6 LOC111668805 LOC111668805 rfxank rfxank tbp tbp LOC111664538 LOC111664538 taf10 taf10 hltf hltf gtf2e2 gtf2e2 junb junb LOC111669995 LOC111669995 LOC111645724 LOC111645724 LOC111671215 LOC111671215 LOC111670016 LOC111670016 smad1 smad1 ascc2 ascc2 LOC111670683 LOC111670683 ddit3 ddit3 ENSSLDP00000007097 ENSSLDP00000007097 hlf hlf CREB1 CREB1 bcl9l bcl9l JUND JUND ENSSLDP00000008454 ENSSLDP00000008454 LOC111653144 LOC111653144 LOC111648222 LOC111648222 smad7 smad7 atf3 atf3 LOC111659833 LOC111659833 ENSSLDP00000009527 ENSSLDP00000009527 nr1h3 nr1h3 med17 med17 stat3 stat3 taf11 taf11 gtf2f1 gtf2f1 e2f7 e2f7 LOC111647923 LOC111647923 ercc3 ercc3 gtf2f2 gtf2f2 CLOCK CLOCK LOC111648760 LOC111648760 LOC111645025 LOC111645025 e2f8 e2f8 taf5 taf5 LOC111652073 LOC111652073 ENSSLDP00000013090 ENSSLDP00000013090 LOC111647896 LOC111647896 LOC111661150 LOC111661150 nfyc nfyc taf3 taf3 gemin5 gemin5 taf4 taf4 SMAD4 SMAD4 ENSSLDP00000014505 ENSSLDP00000014505 ENSSLDP00000014519 ENSSLDP00000014519 LOC111670993 LOC111670993 RXRB RXRB ENSSLDP00000015085 ENSSLDP00000015085 MAFG MAFG LOC111645474 LOC111645474 ENSSLDP00000015659 ENSSLDP00000015659 LOC111669183 LOC111669183 taf6l taf6l Cebpd Cebpd e2f4 e2f4 LOC111661872 LOC111661872 arntl arntl nfyb nfyb smad2 smad2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nfatc2Nuclear factor of activated T cells 2a. (884 aa)
mnat1MNAT1 component of CDK activating kinase. (236 aa)
trip4Thyroid hormone receptor interactor 4. (573 aa)
LOC111671973Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (288 aa)
LOC111667811Signal transducer and activator of transcription. (788 aa)
LOC111656011THAP-type domain-containing protein. (376 aa)
LOC111653651Nuclear receptor subfamily 5, group A, member 5. (545 aa)
HAND1Heart and neural crest derivatives expressed 1. (191 aa)
LOC111671359Activating transcription factor 5b. (504 aa)
pou2af1Uncharacterized protein. (264 aa)
LOC111653033Si:ch211-153j24.3. (403 aa)
LOC111654356KID domain-containing protein. (252 aa)
LOC111667693Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (478 aa)
LOC111667645Activating transcription factor 1. (311 aa)
LOC111644705Mothers against decapentaplegic homolog. (550 aa)
nfyaNuclear transcription factor Y, alpha, like. (355 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (153 aa)
taf9TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (209 aa)
CebpaCCAAT enhancer binding protein alpha. (142 aa)
ENSSLDP00000004146STAT_int domain-containing protein. (130 aa)
LOC111668433cAMP responsive element modulator a. (256 aa)
LOC111664669NK2 homeobox 5. (327 aa)
LOC111668928Nuclear factor, erythroid 2. (491 aa)
gtf2a1General transcription factor IIA, 1. (351 aa)
LOC111656197Uncharacterized protein. (203 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (308 aa)
LOC111658510THAP-type domain-containing protein. (407 aa)
trrapTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3843 aa)
Ascl1Achaete-scute family bHLH transcription factor 1a. (198 aa)
LOC111671419E2F_TDP domain-containing protein. (327 aa)
LOC111661182D site albumin promoter binding protein a. (376 aa)
LOC111648020Mothers against decapentaplegic homolog. (467 aa)
LOC111647417Si:dkey-219c3.2. (900 aa)
cbfbCore-binding factor subunit beta. (188 aa)
LOC111653955Neuronal PAS domain protein 2. (832 aa)
pygo2Pygopus homolog 2 (Drosophila). (594 aa)
stat4Signal transducer and activator of transcription. (696 aa)
xbp1X-box binding protein 1. (297 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
ENSSLDP00000020317General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (427 aa)
LOC111661970Activity-dependent neuroprotector homeobox b. (1070 aa)
fosl2Fos-like antigen 2. (329 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
LOC111656331Uncharacterized protein. (515 aa)
atf6Activating transcription factor 6. (645 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
LOC111653959Transcription initiation factor TFIID subunit. (1990 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
LOC111648134JunE proto-oncogene, AP-1 transcription factor subunit. (343 aa)
LOC111672326TAFH domain-containing protein. (942 aa)
ENSSLDP00000021689Uncharacterized protein. (167 aa)
rb1Retinoblastoma 1. (914 aa)
LOC111664345HLF transcription factor, PAR bZIP family member b. (308 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (233 aa)
tcf7Transcription factor 7. (451 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
ARNTL2Aryl hydrocarbon receptor nuclear translocator like 2. (613 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (339 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (278 aa)
tfdp1Transcription factor. (413 aa)
bach2BTB and CNC homology 1, basic leucine zipper transcription factor 2b. (823 aa)
med31Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (130 aa)
LOC111646255E2F_TDP domain-containing protein. (353 aa)
atf2Activating transcription factor 2. (523 aa)
med6Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (246 aa)
LOC111653909Activating transcription factor 5a. (505 aa)
LOC111645167cAMP responsive element binding protein 3-like 3 like. (498 aa)
nfe2l2Nuclear factor, erythroid 2-like 2a. (612 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1836 aa)
e2f1E2F transcription factor 1. (455 aa)
tcf7l2Transcription factor 7 like 2. (630 aa)
e2f2Si:ch211-160f23.5. (444 aa)
med8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
dr1Down-regulator of transcription 1. (176 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
atf6bBZIP domain-containing protein. (733 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
LOC111672441Signal transducer and activator of transcription. (787 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
med4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (253 aa)
LOC111671132JunD proto-oncogene, AP-1 transcription factor subunit. (312 aa)
LOC111652301JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (421 aa)
LOC111663204V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. (378 aa)
cebpzCCAAT enhancer binding protein zeta. (1096 aa)
LOC111671129TFIIS N-terminal domain-containing protein. (639 aa)
rxraRetinoid X receptor, alpha a. (499 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (373 aa)
LOC111671828Activating transcription factor 4a. (464 aa)
med9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (99 aa)
NR5A1Nuclear receptor subfamily 5 group A member 1. (463 aa)
LOC111652339Uncharacterized protein. (746 aa)
LOC111657772V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga. (162 aa)
E2F3E2F transcription factor 3. (442 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (444 aa)
MAXMYC associated factor X. (114 aa)
ASCL5Achaete-scute family bHLH transcription factor 5. (183 aa)
LOC111652387General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1213 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
LOC111669870D site albumin promoter binding protein b. (376 aa)
LOC111646480Mothers against decapentaplegic homolog. (471 aa)
LOC111655341Aryl hydrocarbon receptor nuclear translocator-like 2. (639 aa)
LOC111673158cAMP responsive element binding protein 1b. (330 aa)
fosl1FOS-like antigen 1a. (344 aa)
med14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1365 aa)
smad9Mothers against decapentaplegic homolog. (468 aa)
rfxapRegulatory factor X-associated protein. (213 aa)
LOC111664452HMG box domain-containing protein. (400 aa)
maxMyc associated factor X. (177 aa)
lef1Lymphoid enhancer-binding factor 1. (366 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
smad6Mothers against decapentaplegic homolog. (491 aa)
LOC111668805Retinoid x receptor, beta b. (374 aa)
rfxankRegulatory factor X-associated ankyrin-containing protein. (234 aa)
tbpTATA box binding protein. (253 aa)
LOC111664538Uncharacterized protein. (834 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
hltfHelicase-like transcription factor. (970 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (284 aa)
junbJunB proto-oncogene, AP-1 transcription factor subunit b. (303 aa)
LOC111669995Nuclear receptor subfamily 5, group A, member 2. (521 aa)
LOC111645724Mothers against decapentaplegic homolog. (510 aa)
LOC111671215Achaete-scute family bHLH transcription factor 1b. (183 aa)
LOC111670016TFIIS N-terminal domain-containing protein. (579 aa)
smad1Mothers against decapentaplegic homolog. (467 aa)
ascc2Activating signal cointegrator 1 complex subunit 2. (752 aa)
LOC111670683Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (504 aa)
ddit3DNA-damage-inducible transcript 3. (312 aa)
ENSSLDP00000007097BTB domain-containing protein. (178 aa)
hlfBZIP domain-containing protein. (301 aa)
CREB1cAMP responsive element binding protein 1. (318 aa)
bcl9lBcl9 like. (1519 aa)
JUNDBZIP domain-containing protein. (284 aa)
ENSSLDP00000008454PH_TFIIH domain-containing protein. (61 aa)
LOC111653144BTB and CNC homology 1, basic leucine zipper transcription factor 1 a. (666 aa)
LOC111648222CCAAT/enhancer binding protein (C/EBP) 1. (184 aa)
smad7Mothers against decapentaplegic homolog. (377 aa)
atf3Activating transcription factor 3. (226 aa)
LOC111659833BZIP domain-containing protein. (149 aa)
ENSSLDP00000009527BHLH domain-containing protein. (185 aa)
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)
med17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (594 aa)
stat3Signal transducer and activator of transcription. (783 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (205 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
e2f7E2F transcription factor 7. (800 aa)
LOC111647923Nuclear receptor subfamily 5, group A, member 1a. (473 aa)
ercc3Excision repair cross-complementation group 3. (803 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
CLOCKClock circadian regulator a. (870 aa)
LOC111648760MH2 domain-containing protein. (170 aa)
LOC111645025Transcription factor 7 like 1b. (542 aa)
e2f8E2F transcription factor 8. (869 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
LOC111652073KID domain-containing protein. (162 aa)
ENSSLDP00000013090Mothers against decapentaplegic homolog. (509 aa)
LOC111647896General transcription factor IIH subunit. (392 aa)
LOC111661150Mothers against decapentaplegic homolog. (425 aa)
nfycNuclear transcription factor Y, gamma. (354 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1410 aa)
taf4TATA-box binding protein associated factor 4. (996 aa)
SMAD4Mothers against decapentaplegic homolog. (503 aa)
ENSSLDP00000014505E2F transcription factor 5. (163 aa)
ENSSLDP00000014519E2F transcription factor 5. (155 aa)
LOC111670993TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (881 aa)
RXRBUncharacterized protein. (470 aa)
ENSSLDP00000015085TAF4 domain-containing protein. (274 aa)
MAFGMAF bZIP transcription factor G. (171 aa)
LOC111645474Uncharacterized protein. (778 aa)
ENSSLDP00000015659Regulatory factor X, 5. (492 aa)
LOC111669183Mothers against decapentaplegic homolog. (585 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (627 aa)
CebpdCCAAT/enhancer-binding protein. (300 aa)
e2f4E2F transcription factor 4. (392 aa)
LOC111661872CCAAT enhancer binding protein beta. (297 aa)
arntlAryl hydrocarbon receptor nuclear translocator-like 1a. (592 aa)
nfybNuclear transcription factor Y, beta a. (204 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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