45 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111665907	SAM and SH3 domain containing 1b. (1159 aa)
	LOC111660920	SCY domain-containing protein. (109 aa)
	phb	Prohibitin. (271 aa)
	ENSSLDP00000003110	Uncharacterized protein. (505 aa)
	LOC111663406	Uncharacterized protein. (376 aa)
	LOC111655504	C1q and TNF related 4. (392 aa)
	GREM1	Gremlin. (182 aa)
	LOC111666074	Uncharacterized protein. (188 aa)
	cunh20orf27	Si:ch211-74f19.2. (181 aa)
	ENSSLDP00000008114	Uncharacterized protein. (906 aa)
	LOC111653136	LRRCT domain-containing protein. (361 aa)
	LOC111649120	CARD domain-containing protein. (121 aa)
	LOC111663583	Uncharacterized protein. (1122 aa)
	ENSSLDP00000010179	NACHT domain-containing protein. (650 aa)
	sash1	SAM and SH3 domain containing 1a. (1357 aa)
	rbck1	RanBP-type and C3HC4-type zinc finger containing 1. (524 aa)
	ENSSLDP00000012073	Ectodysplasin A; Belongs to the tumor necrosis factor family. (332 aa)
	LOC111646106	E1A binding protein p300 a. (2843 aa)
	LOC111662352	RING-type domain-containing protein. (398 aa)
	LOC111673439	Prohibitin. (266 aa)
	pdcd4	Programmed cell death 4b. (474 aa)
	tcim	Transcriptional and immune response regulator a. (100 aa)
	rc3h1	Ring finger and CCCH-type domains 1b. (1137 aa)
	LOC111665589	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (259 aa)
	LOC111666302	Integrin linked kinase. (452 aa)
	ENSSLDP00000020462	Tumor necrosis factor a (TNF superfamily, member 2). (260 aa)
	LOC111651524	Ring finger and CCCH-type domains 2. (1155 aa)
	LOC111670412	Programmed cell death 4a. (468 aa)
	ifi35	Interferon-induced protein 35. (352 aa)
	nod2	Nucleotide-binding oligomerization domain containing 2. (1005 aa)
	LOC111647585	E1A binding protein p300 b. (2679 aa)
	LOC111658356	Nuclear factor of activated T cells 5b. (1295 aa)
	nod1	Nucleotide-binding oligomerization domain containing 1. (850 aa)
	PTP4A3	Protein tyrosine phosphatase 4A3. (170 aa)
	LOC111655332	Si:ch211-219a15.3. (367 aa)
	grem1	Gremlin 1a, DAN family BMP antagonist. (179 aa)
	LOC111671211	Nuclear factor of activated T cells 5a. (1485 aa)
	ENSSLDP00000032378	Uncharacterized protein; Belongs to the protein kinase superfamily. (472 aa)
	ENSSLDP00000032389	Eukaryotic translation initiation factor 2-alpha kinase 2. (700 aa)
	ENSSLDP00000032400	Eukaryotic translation initiation factor 2-alpha kinase 2. (665 aa)
	ENSSLDP00000032423	Eukaryotic translation initiation factor 2-alpha kinase 2. (701 aa)
	LOC111660942	Interleukin-1. (264 aa)
	Trim44	Tripartite motif containing 44. (346 aa)
	LOC111660964	Interleukin-1. (250 aa)
	ILK	Integrin linked kinase. (452 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000010179	ENSSLDP00000020462	ENSSLDP00000010179	ENSSLDP00000020462	NACHT domain-containing protein.	Tumor necrosis factor a (TNF superfamily, member 2).	0.422
ENSSLDP00000020462	ENSSLDP00000010179	ENSSLDP00000020462	ENSSLDP00000010179	Tumor necrosis factor a (TNF superfamily, member 2).	NACHT domain-containing protein.	0.422
ENSSLDP00000020462	LOC111660920	ENSSLDP00000020462	ENSSLDP00000002155	Tumor necrosis factor a (TNF superfamily, member 2).	SCY domain-containing protein.	0.467
ENSSLDP00000020462	LOC111660942	ENSSLDP00000020462	ENSSLDP00000032769	Tumor necrosis factor a (TNF superfamily, member 2).	Interleukin-1.	0.734
ENSSLDP00000020462	LOC111660964	ENSSLDP00000020462	ENSSLDP00000032774	Tumor necrosis factor a (TNF superfamily, member 2).	Interleukin-1.	0.734
ENSSLDP00000020462	LOC111665589	ENSSLDP00000020462	ENSSLDP00000019670	Tumor necrosis factor a (TNF superfamily, member 2).	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.477
ENSSLDP00000020462	LOC111666074	ENSSLDP00000020462	ENSSLDP00000007279	Tumor necrosis factor a (TNF superfamily, member 2).	Uncharacterized protein.	0.734
ENSSLDP00000020462	nod2	ENSSLDP00000020462	ENSSLDP00000022461	Tumor necrosis factor a (TNF superfamily, member 2).	Nucleotide-binding oligomerization domain containing 2.	0.422
ENSSLDP00000020462	rbck1	ENSSLDP00000020462	ENSSLDP00000010411	Tumor necrosis factor a (TNF superfamily, member 2).	RanBP-type and C3HC4-type zinc finger containing 1.	0.910
ENSSLDP00000032378	ifi35	ENSSLDP00000032378	ENSSLDP00000021372	Uncharacterized protein; Belongs to the protein kinase superfamily.	Interferon-induced protein 35.	0.412
ENSSLDP00000032389	ifi35	ENSSLDP00000032389	ENSSLDP00000021372	Eukaryotic translation initiation factor 2-alpha kinase 2.	Interferon-induced protein 35.	0.412
ENSSLDP00000032400	ifi35	ENSSLDP00000032400	ENSSLDP00000021372	Eukaryotic translation initiation factor 2-alpha kinase 2.	Interferon-induced protein 35.	0.412
ENSSLDP00000032423	ifi35	ENSSLDP00000032423	ENSSLDP00000021372	Eukaryotic translation initiation factor 2-alpha kinase 2.	Interferon-induced protein 35.	0.412
GREM1	grem1	ENSSLDP00000006093	ENSSLDP00000029770	Gremlin.	Gremlin 1a, DAN family BMP antagonist.	0.902
ILK	LOC111666302	ENSSLDP00000000621	ENSSLDP00000019791	Integrin linked kinase.	Integrin linked kinase.	0.900
LOC111649120	nod1	ENSSLDP00000009133	ENSSLDP00000028613	CARD domain-containing protein.	Nucleotide-binding oligomerization domain containing 1.	0.888
LOC111651524	LOC111662352	ENSSLDP00000020543	ENSSLDP00000014833	Ring finger and CCCH-type domains 2.	RING-type domain-containing protein.	0.573
LOC111651524	rc3h1	ENSSLDP00000020543	ENSSLDP00000017247	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.584
LOC111660920	ENSSLDP00000020462	ENSSLDP00000002155	ENSSLDP00000020462	SCY domain-containing protein.	Tumor necrosis factor a (TNF superfamily, member 2).	0.467
LOC111660942	ENSSLDP00000020462	ENSSLDP00000032769	ENSSLDP00000020462	Interleukin-1.	Tumor necrosis factor a (TNF superfamily, member 2).	0.734