STRINGSTRING
ccnk ccnk ccnt1 ccnt1 LOC111646012 LOC111646012 nelfcd nelfcd nelfa nelfa iah1 iah1 ell ell ell2 ell2 Eloa Eloa cinp cinp ttf2 ttf2 cdk9 cdk9 ENSSLDP00000019420 ENSSLDP00000019420 supt6h supt6h cdc73 cdc73 supt4h1 supt4h1 cdk13 cdk13 LOC111667384 LOC111667384 ctr9 ctr9 ENSSLDP00000028858 ENSSLDP00000028858 Aff2 Aff2 nelfe nelfe mllt3 mllt3 eaf1 eaf1 pex2 pex2 CCNK CCNK leo1 leo1 rtf1 rtf1 nelfb nelfb supt16h supt16h eaf2 eaf2 supt5h supt5h aff4 aff4 eloc eloc LOC111656821 LOC111656821 ENSSLDP00000008518 ENSSLDP00000008518 ercc6 ercc6 LOC111666869 LOC111666869 LOC111656677 LOC111656677 ssrp1 ssrp1 wdr61 wdr61 LOC111670156 LOC111670156 ENSSLDP00000002558 ENSSLDP00000002558 paf1 paf1 cdk12 cdk12 LOC111659175 LOC111659175 ENSSLDP00000008130 ENSSLDP00000008130 mllt1 mllt1 ENSSLDP00000006772 ENSSLDP00000006772 aff3 aff3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnkCyclin K; Belongs to the cyclin family. (553 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (696 aa)
LOC111646012Cyclin T2b; Belongs to the cyclin family. (553 aa)
nelfcdNegative elongation factor complex member C/D. (579 aa)
nelfaNegative elongation factor complex member A. (547 aa)
iah1Isoamyl acetate hydrolyzing esterase 1 (putative). (243 aa)
ellElongation factor RNA polymerase II. (564 aa)
ell2Elongation factor, RNA polymerase II, 2. (626 aa)
EloaElongin A. (219 aa)
cinpCyclin-dependent kinase 2 interacting protein. (220 aa)
ttf2Transcription termination factor, RNA polymerase II. (1119 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (374 aa)
ENSSLDP00000019420EAF domain-containing protein. (80 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1649 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
cdk13Cyclin-dependent kinase 13. (1419 aa)
LOC111667384Cyclin T2; Belongs to the cyclin family. (712 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1163 aa)
ENSSLDP00000028858Uncharacterized protein. (416 aa)
Aff2AF4/FMR2 family, member 2. (900 aa)
nelfeNegative elongation factor complex member E. (344 aa)
mllt3MLLT3 super elongation complex subunit. (540 aa)
eaf1ELL associated factor 1. (259 aa)
pex2Peroxisomal biogenesis factor 2. (331 aa)
CCNKCyclin K; Belongs to the cyclin family. (478 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (636 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
nelfbNegative elongation factor complex member B. (583 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1031 aa)
eaf2ELL associated factor 2. (266 aa)
supt5hTranscription elongation factor SPT5. (1084 aa)
aff4AF4/FMR2 family, member 4. (1155 aa)
elocElongin C paralog a; Belongs to the SKP1 family. (112 aa)
LOC111656821Uncharacterized protein. (1206 aa)
ENSSLDP00000008518PWWP domain-containing protein. (94 aa)
ercc6Excision repair cross-complementation group 6. (1394 aa)
LOC111666869Si:ch211-13k12.2. (599 aa)
LOC111656677Elongin A, like. (580 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (702 aa)
wdr61WD repeat domain 61. (305 aa)
LOC111670156Uncharacterized protein. (622 aa)
ENSSLDP00000002558Protein kinase domain-containing protein. (298 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (525 aa)
cdk12Cyclin-dependent kinase 12. (1360 aa)
LOC111659175Uncharacterized protein. (610 aa)
ENSSLDP00000008130WD_REPEATS_REGION domain-containing protein. (160 aa)
mllt1MLLT1 super elongation complex subunit a. (593 aa)
ENSSLDP00000006772Protein kinase domain-containing protein. (71 aa)
aff3AF4/FMR2 family, member 3. (1124 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.