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rpap2 rpap2 mnat1 mnat1 prim2 prim2 recql5 recql5 wdr61 wdr61 polr2g polr2g paf1 paf1 polr2h polr2h cdk7 cdk7 LOC111662240 LOC111662240 ENSSLDP00000004562 ENSSLDP00000004562 gtf2a1 gtf2a1 taf8 taf8 cdk20 cdk20 POLR2E POLR2E ENSSLDP00000008130 ENSSLDP00000008130 ENSSLDP00000008454 ENSSLDP00000008454 taf11 taf11 gtf2f1 gtf2f1 ercc3 ercc3 pola1 pola1 gtf2f2 gtf2f2 polr2i polr2i polr3d polr3d rtf1 rtf1 taf5 taf5 LOC111647896 LOC111647896 rprd1a rprd1a prim1 prim1 leo1 leo1 pex2 pex2 taf3 taf3 taf4 taf4 LOC111670993 LOC111670993 ENSSLDP00000015085 ENSSLDP00000015085 LOC111655652 LOC111655652 polr3f polr3f polr2m polr2m twistnb twistnb LOC111657619 LOC111657619 polr2k polr2k LOC111647417 LOC111647417 pola2 pola2 gtf2a2 gtf2a2 LOC111652165 LOC111652165 POLR1B POLR1B polr3c polr3c znrd1 znrd1 ENSSLDP00000020317 ENSSLDP00000020317 LOC111645564 LOC111645564 LOC111664401 LOC111664401 taf13 taf13 LOC111653959 LOC111653959 taf5l taf5l polr2b polr2b LOC111672326 LOC111672326 ENSSLDP00000021689 ENSSLDP00000021689 ccnh ccnh supt3h supt3h gtf2h3 gtf2h3 polr1c polr1c LOC111663068 LOC111663068 cinp cinp cdc73 cdc73 gtf2h5 gtf2h5 polr2a polr2a polr3g polr3g Polr1b Polr1b gtf2a1l gtf2a1l ctr9 ctr9 gtf2e1 gtf2e1 polr2j polr2j LOC111652387 LOC111652387 taf2 taf2 gtf2h1 gtf2h1 ENSSLDP00000029588 ENSSLDP00000029588 wdr47 wdr47 LOC111646446 LOC111646446 rprd1b rprd1b tbp tbp polr1a polr1a polr2d polr2d gtf2e2 gtf2e2 polr2f polr2f polr1e polr1e LOC111669975 LOC111669975
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpap2RNA polymerase II associated protein 2. (679 aa)
mnat1MNAT1 component of CDK activating kinase. (236 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (516 aa)
recql5RecQ helicase-like 5. (1022 aa)
wdr61WD repeat domain 61. (305 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (525 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
LOC111662240CD3e molecule, epsilon associated protein. (343 aa)
ENSSLDP00000004562RPA43_OB domain-containing protein. (311 aa)
gtf2a1General transcription factor IIA, 1. (351 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (308 aa)
cdk20Cyclin-dependent kinase 20; Belongs to the protein kinase superfamily. (323 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSSLDP00000008130WD_REPEATS_REGION domain-containing protein. (160 aa)
ENSSLDP00000008454PH_TFIIH domain-containing protein. (61 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (205 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
ercc3Excision repair cross-complementation group 3. (803 aa)
pola1DNA polymerase. (1371 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr3dPolymerase (RNA) III (DNA directed) polypeptide D. (387 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (677 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
LOC111647896General transcription factor IIH subunit. (392 aa)
rprd1aRegulation of nuclear pre-mRNA domain containing 1A. (294 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (423 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (636 aa)
pex2Peroxisomal biogenesis factor 2. (331 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
taf4TATA-box binding protein associated factor 4. (996 aa)
LOC111670993TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (881 aa)
ENSSLDP00000015085TAF4 domain-containing protein. (274 aa)
LOC111655652SH3-binding domain protein 5-like, a. (403 aa)
polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
polr2mRNA polymerase II subunit M. (358 aa)
twistnbUncharacterized protein. (380 aa)
LOC111657619Regulation of nuclear pre-mRNA domain containing 2a. (1069 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC111647417Si:dkey-219c3.2. (900 aa)
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
LOC111652165Regulation of nuclear pre-mRNA domain containing 2b. (1194 aa)
POLR1BRNA polymerase I subunit B; Belongs to the RNA polymerase beta chain family. (516 aa)
polr3cRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (566 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
ENSSLDP00000020317General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (427 aa)
LOC111645564General transcription factor IIH, polypeptide 4. (466 aa)
LOC111664401Zgc:171971. (404 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
LOC111653959Transcription initiation factor TFIID subunit. (1990 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC111672326TAFH domain-containing protein. (942 aa)
ENSSLDP00000021689Uncharacterized protein. (167 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (339 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (278 aa)
polr1cRNA polymerase I and III subunit C. (384 aa)
LOC111663068Polymerase (DNA directed) iota. (728 aa)
cinpCyclin-dependent kinase 2 interacting protein. (220 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
polr3gDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (212 aa)
Polr1bRNA_pol_Rpb2_1 domain-containing protein. (154 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (373 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1163 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (444 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC111652387General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1213 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
ENSSLDP00000029588Uncharacterized protein. (110 aa)
wdr47WD repeat domain 47a. (914 aa)
LOC111646446RNA polymerase I and III subunit D. (118 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
tbpTATA box binding protein. (253 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1635 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (284 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
polr1eRNA polymerase I subunit E. (420 aa)
LOC111669975WD repeat domain 47b. (890 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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