66 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSLDP00000000702	Ldh_1_C domain-containing protein. (54 aa)
	LOC111658418	Phosphatase, orphan 1. (285 aa)
	LOC111673202	Uncharacterized protein. (317 aa)
	LOC111654711	Uncharacterized protein. (212 aa)
	LOC111664670	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (361 aa)
	ENSSLDP00000003285	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (325 aa)
	mmp9	Matrix metallopeptidase 9. (654 aa)
	LOC111655506	Metalloendopeptidase. (259 aa)
	LOC111655492	Metalloendopeptidase. (257 aa)
	ENSSLDP00000004947	Uncharacterized protein. (254 aa)
	arpc2	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (299 aa)
	nsun2	NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (765 aa)
	rack1	Receptor for activated C kinase 1. (317 aa)
	LOC111646674	Heterogeneous nuclear ribonucleoprotein A/Ba. (330 aa)
	ENSSLDP00000006708	Uncharacterized protein. (124 aa)
	LOC111657368	Annexin. (317 aa)
	LOC111663530	Matrix metallopeptidase 13a. (474 aa)
	galk2	Galactokinase 2. (466 aa)
	LOC111672110	Heat shock protein 4a. (823 aa)
	LOC111665415	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
	LOC111651565	Uncharacterized protein. (285 aa)
	G6PD	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (528 aa)
	LOC111647859	Arrestin domain containing 1a. (466 aa)
	ENSSLDP00000012063	Uncharacterized protein. (189 aa)
	LOC111671539	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (514 aa)
	Cd84	Uncharacterized protein. (264 aa)
	pdcd6ip	BRO1 domain-containing protein. (917 aa)
	LOC111670844	L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (355 aa)
	LOC111670952	RAB7a, member RAS oncogene family. (207 aa)
	LOC111661945	Uncharacterized protein. (185 aa)
	LOC111652709	Heat shock protein 4b. (845 aa)
	LOC111672261	Phosphatase, orphan 2. (243 aa)
	LOC111653289	Guanylate kinase 1a. (211 aa)
	LOC111664237	L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (346 aa)
	arrdc1	Arrestin domain containing 1b. (440 aa)
	LOC111656265	Glycyl-tRNA synthetase. (676 aa)
	LOC111656262	Glycyl-tRNA synthetase. (749 aa)
	LOC111669287	Metalloendopeptidase. (281 aa)
	LOC111669305	Metalloendopeptidase. (230 aa)
	LOC111669286	Metalloendopeptidase. (290 aa)
	LOC111669288	Metalloendopeptidase. (250 aa)
	naglu	N-acetylglucosaminidase, alpha. (751 aa)
	anxa4	Annexin. (320 aa)
	LOC111651542	Uncharacterized protein. (505 aa)
	LOC111650179	Guanylate kinase 1b. (239 aa)
	LOC111661323	Uncharacterized protein. (184 aa)
	LOC111650973	RAP1A, member of RAS oncogene family b. (185 aa)
	GPRC5D	G protein-coupled receptor class C group 5 member D. (427 aa)
	ENSSLDP00000024165	Uncharacterized protein. (264 aa)
	hexd	Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing. (480 aa)
	LOC111665061	Metalloendopeptidase. (255 aa)
	LOC111665060	Metalloendopeptidase. (259 aa)
	LOC111662152	Ig-like domain-containing protein. (748 aa)
	LOC111644677	Annexin. (298 aa)
	gprc5c	G protein-coupled receptor, class C, group 5, member C. (418 aa)
	rbmx	RNA binding motif protein X-linked. (393 aa)
	LOC111657757	G_PROTEIN_RECEP_F3_4 domain-containing protein. (406 aa)
	gprc5b	G protein-coupled receptor, class C, group 5, member Ba. (398 aa)
	egf	Epidermal growth factor. (1052 aa)
	tmem98	Transmembrane protein 98. (224 aa)
	acy1	Aminoacylase 1. (419 aa)
	ybx1	Y box binding protein 1. (302 aa)
	LOC111667766	Uncharacterized protein. (207 aa)
	LOC111654225	Uncharacterized protein. (212 aa)
	LOC111670634	WAP four-disulfide core domain 2. (172 aa)
	LOC111659035	G protein-coupled receptor, class C, group 5, member Bb. (420 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000006708	rack1	ENSSLDP00000006708	ENSSLDP00000006234	Uncharacterized protein.	Receptor for activated C kinase 1.	0.454
ENSSLDP00000012063	LOC111646674	ENSSLDP00000012063	ENSSLDP00000006533	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein A/Ba.	0.416
ENSSLDP00000012063	LOC111673202	ENSSLDP00000012063	ENSSLDP00000002341	Uncharacterized protein.	Uncharacterized protein.	0.416
ENSSLDP00000012063	nsun2	ENSSLDP00000012063	ENSSLDP00000005677	Uncharacterized protein.	NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.430
ENSSLDP00000012063	rbmx	ENSSLDP00000012063	ENSSLDP00000027574	Uncharacterized protein.	RNA binding motif protein X-linked.	0.403
ENSSLDP00000024165	LOC111658418	ENSSLDP00000024165	ENSSLDP00000002157	Uncharacterized protein.	Phosphatase, orphan 1.	0.902
G6PD	LOC111664237	ENSSLDP00000010515	ENSSLDP00000017827	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.	0.831
G6PD	LOC111670844	ENSSLDP00000010515	ENSSLDP00000014113	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.	0.831
G6PD	LOC111671539	ENSSLDP00000010515	ENSSLDP00000012100	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.900
LOC111646674	ENSSLDP00000012063	ENSSLDP00000006533	ENSSLDP00000012063	Heterogeneous nuclear ribonucleoprotein A/Ba.	Uncharacterized protein.	0.416
LOC111646674	rbmx	ENSSLDP00000006533	ENSSLDP00000027574	Heterogeneous nuclear ribonucleoprotein A/Ba.	RNA binding motif protein X-linked.	0.522
LOC111646674	ybx1	ENSSLDP00000006533	ENSSLDP00000031704	Heterogeneous nuclear ribonucleoprotein A/Ba.	Y box binding protein 1.	0.416
LOC111650179	LOC111653289	ENSSLDP00000021735	ENSSLDP00000017621	Guanylate kinase 1b.	Guanylate kinase 1a.	0.901
LOC111650973	LOC111661323	ENSSLDP00000021876	ENSSLDP00000021781	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111650973	LOC111661945	ENSSLDP00000021876	ENSSLDP00000016623	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111651565	rack1	ENSSLDP00000010102	ENSSLDP00000006234	Uncharacterized protein.	Receptor for activated C kinase 1.	0.454
LOC111652709	rack1	ENSSLDP00000017379	ENSSLDP00000006234	Heat shock protein 4b.	Receptor for activated C kinase 1.	0.454
LOC111653289	LOC111650179	ENSSLDP00000017621	ENSSLDP00000021735	Guanylate kinase 1a.	Guanylate kinase 1b.	0.901
LOC111656262	LOC111656265	ENSSLDP00000018130	ENSSLDP00000018093	Glycyl-tRNA synthetase.	Glycyl-tRNA synthetase.	0.900
LOC111656265	LOC111656262	ENSSLDP00000018093	ENSSLDP00000018130	Glycyl-tRNA synthetase.	Glycyl-tRNA synthetase.	0.900