26 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111667052	Ras protein specific guanine nucleotide releasing factor 1. (1195 aa)
	rapgef1	Rap guanine nucleotide exchange factor (GEF) 1b. (1100 aa)
	LOC111662478	Uncharacterized protein. (739 aa)
	rgl1	Ral guanine nucleotide dissociation stimulator-like 1. (814 aa)
	LOC111671130	Zgc:171558. (976 aa)
	rasgrp3	RAS guanyl releasing protein 3 (calcium and DAG-regulated). (728 aa)
	sos1	Son of sevenless homolog 1 (Drosophila). (1217 aa)
	RASGRP1	RAS guanyl releasing protein 1. (590 aa)
	RAPGEF5	Uncharacterized protein. (564 aa)
	ralgds	Ral guanine nucleotide dissociation stimulator. (848 aa)
	RASGRP2	RAS guanyl releasing protein 2. (597 aa)
	ENSSLDP00000009863	Rap guanine nucleotide exchange factor (GEF) 5a. (624 aa)
	RASGEF1B	RasGEF domain family member 1B. (473 aa)
	LOC111659091	Ras protein specific guanine nucleotide releasing factor 1. (1192 aa)
	sos2	Son of sevenless homolog 2 (Drosophila). (1332 aa)
	RASGEF1C	RasGEF domain family member 1C. (488 aa)
	LOC111662274	RAS guanyl releasing protein 4. (700 aa)
	rasgrf2	Uncharacterized protein. (1180 aa)
	rapgef6	Rap guanine nucleotide exchange factor (GEF) 6. (1545 aa)
	LOC111666737	Ral guanine nucleotide dissociation stimulator-like 3a. (804 aa)
	rapgef4	Rap guanine nucleotide exchange factor (GEF) 4. (831 aa)
	LOC111666035	Ras protein-specific guanine nucleotide-releasing factor 2a. (1182 aa)
	LOC111655668	Ral guanine nucleotide dissociation stimulator-like 2. (743 aa)
	LOC111655752	RasGEF domain family, member 1Bb. (600 aa)
	rapgef2	Rap guanine nucleotide exchange factor (GEF) 2. (1627 aa)
	LOC111661896	Rap guanine nucleotide exchange factor (GEF) 3. (868 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111655752	rapgef2	ENSSLDP00000018788	ENSSLDP00000018866	RasGEF domain family, member 1Bb.	Rap guanine nucleotide exchange factor (GEF) 2.	0.524
LOC111659091	LOC111666035	ENSSLDP00000004583	ENSSLDP00000013317	Ras protein specific guanine nucleotide releasing factor 1.	Ras protein-specific guanine nucleotide-releasing factor 2a.	0.480
LOC111659091	rapgef2	ENSSLDP00000004583	ENSSLDP00000018866	Ras protein specific guanine nucleotide releasing factor 1.	Rap guanine nucleotide exchange factor (GEF) 2.	0.424
LOC111659091	rasgrf2	ENSSLDP00000004583	ENSSLDP00000007349	Ras protein specific guanine nucleotide releasing factor 1.	Uncharacterized protein.	0.479
LOC111661896	LOC111671130	ENSSLDP00000018990	ENSSLDP00000025715	Rap guanine nucleotide exchange factor (GEF) 3.	Zgc:171558.	0.553
LOC111661896	rapgef4	ENSSLDP00000018990	ENSSLDP00000015931	Rap guanine nucleotide exchange factor (GEF) 3.	Rap guanine nucleotide exchange factor (GEF) 4.	0.952
LOC111666035	LOC111659091	ENSSLDP00000013317	ENSSLDP00000004583	Ras protein-specific guanine nucleotide-releasing factor 2a.	Ras protein specific guanine nucleotide releasing factor 1.	0.480
LOC111666035	LOC111667052	ENSSLDP00000013317	ENSSLDP00000000855	Ras protein-specific guanine nucleotide-releasing factor 2a.	Ras protein specific guanine nucleotide releasing factor 1.	0.479
LOC111666035	rapgef2	ENSSLDP00000013317	ENSSLDP00000018866	Ras protein-specific guanine nucleotide-releasing factor 2a.	Rap guanine nucleotide exchange factor (GEF) 2.	0.424
LOC111667052	LOC111666035	ENSSLDP00000000855	ENSSLDP00000013317	Ras protein specific guanine nucleotide releasing factor 1.	Ras protein-specific guanine nucleotide-releasing factor 2a.	0.479
LOC111667052	rapgef2	ENSSLDP00000000855	ENSSLDP00000018866	Ras protein specific guanine nucleotide releasing factor 1.	Rap guanine nucleotide exchange factor (GEF) 2.	0.424
LOC111667052	rasgrf2	ENSSLDP00000000855	ENSSLDP00000007349	Ras protein specific guanine nucleotide releasing factor 1.	Uncharacterized protein.	0.478
LOC111671130	LOC111661896	ENSSLDP00000025715	ENSSLDP00000018990	Zgc:171558.	Rap guanine nucleotide exchange factor (GEF) 3.	0.553
RASGEF1B	rapgef2	ENSSLDP00000001639	ENSSLDP00000018866	RasGEF domain family member 1B.	Rap guanine nucleotide exchange factor (GEF) 2.	0.524
RASGRP2	rasgrp3	ENSSLDP00000032606	ENSSLDP00000026194	RAS guanyl releasing protein 2.	RAS guanyl releasing protein 3 (calcium and DAG-regulated).	0.902
rapgef1	rapgef2	ENSSLDP00000020197	ENSSLDP00000018866	Rap guanine nucleotide exchange factor (GEF) 1b.	Rap guanine nucleotide exchange factor (GEF) 2.	0.439
rapgef2	LOC111655752	ENSSLDP00000018866	ENSSLDP00000018788	Rap guanine nucleotide exchange factor (GEF) 2.	RasGEF domain family, member 1Bb.	0.524
rapgef2	LOC111659091	ENSSLDP00000018866	ENSSLDP00000004583	Rap guanine nucleotide exchange factor (GEF) 2.	Ras protein specific guanine nucleotide releasing factor 1.	0.424
rapgef2	LOC111666035	ENSSLDP00000018866	ENSSLDP00000013317	Rap guanine nucleotide exchange factor (GEF) 2.	Ras protein-specific guanine nucleotide-releasing factor 2a.	0.424
rapgef2	LOC111667052	ENSSLDP00000018866	ENSSLDP00000000855	Rap guanine nucleotide exchange factor (GEF) 2.	Ras protein specific guanine nucleotide releasing factor 1.	0.424