46 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cth	Cystathionase (cystathionine gamma-lyase), like. (409 aa)
	LOC111670752	5-aminolevulinate synthase. (591 aa)
	oat	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
	gcat	Glycine C-acetyltransferase. (427 aa)
	gldc	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (895 aa)
	SHMT2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (502 aa)
	LOC111673710	Aminotran_1_2 domain-containing protein. (531 aa)
	LOC111655360	Aminotran_1_2 domain-containing protein. (981 aa)
	LOC111647656	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (405 aa)
	LOC111652945	Glutamic pyruvate transaminase (alanine aminotransferase) 2, like. (516 aa)
	kyat3	Kynurenine aminotransferase 3. (449 aa)
	sgpl1	Sphingosine-1-phosphate lyase 1. (579 aa)
	ddc	Dopa decarboxylase. (395 aa)
	psat1	Phosphoserine aminotransferase. (368 aa)
	got1	Aspartate aminotransferase. (410 aa)
	shmt1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (531 aa)
	got2	Aspartate aminotransferase. (428 aa)
	sptlc3	Serine palmitoyltransferase, long chain base subunit 3. (549 aa)
	LOC111673531	Threonine aldolase 1. (421 aa)
	sptlc1	Serine palmitoyltransferase, long chain base subunit 1. (472 aa)
	LOC111671698	Aminotran_1_2 domain-containing protein. (435 aa)
	LOC111671632	Aminotran_1_2 domain-containing protein. (507 aa)
	LOC111668074	Kynurenine aminotransferase 1. (445 aa)
	GOT1	Aspartate aminotransferase. (410 aa)
	LOC111654403	Serine--pyruvate aminotransferase. (429 aa)
	LOC111672180	5-aminolevulinate synthase. (638 aa)
	ENSSLDP00000014439	Uncharacterized protein. (90 aa)
	kynu	Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (464 aa)
	hdc	Histidine decarboxylase. (674 aa)
	LOC111665965	Uncharacterized protein. (248 aa)
	GPT	Glutamic--pyruvic transaminase. (491 aa)
	LOC111644964	Glutamic-oxaloacetic transaminase 1 like 1. (420 aa)
	ENSSLDP00000010190	Aminotran_1_2 domain-containing protein. (345 aa)
	nfs1	NFS1 cysteine desulfurase. (432 aa)
	ENSSLDP00000010074	SHMT domain-containing protein. (179 aa)
	ENSSLDP00000009106	Uncharacterized protein. (82 aa)
	LOC111664750	Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (516 aa)
	aadat	Aminoadipate aminotransferase. (425 aa)
	LOC111646524	5-phosphohydroxy-L-lysine phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
	shmt2	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (501 aa)
	etnppl	Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (489 aa)
	tat	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (479 aa)
	LOC111669610	Serine--pyruvate aminotransferase. (391 aa)
	alas1	5-aminolevulinate synthase. (626 aa)
	scly	Selenocysteine lyase. (407 aa)
	sptlc2	Serine palmitoyltransferase, long chain base subunit 2b. (564 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000009106	LOC111654403	ENSSLDP00000009106	ENSSLDP00000015513	Uncharacterized protein.	Serine--pyruvate aminotransferase.	0.501
ENSSLDP00000009106	LOC111669610	ENSSLDP00000009106	ENSSLDP00000005192	Uncharacterized protein.	Serine--pyruvate aminotransferase.	0.501
ENSSLDP00000009106	aadat	ENSSLDP00000009106	ENSSLDP00000007784	Uncharacterized protein.	Aminoadipate aminotransferase.	0.473
ENSSLDP00000009106	cth	ENSSLDP00000009106	ENSSLDP00000004234	Uncharacterized protein.	Cystathionase (cystathionine gamma-lyase), like.	0.406
ENSSLDP00000009106	ddc	ENSSLDP00000009106	ENSSLDP00000026211	Uncharacterized protein.	Dopa decarboxylase.	0.460
ENSSLDP00000009106	hdc	ENSSLDP00000009106	ENSSLDP00000013192	Uncharacterized protein.	Histidine decarboxylase.	0.460
ENSSLDP00000009106	oat	ENSSLDP00000009106	ENSSLDP00000032087	Uncharacterized protein.	Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.433
ENSSLDP00000009106	sgpl1	ENSSLDP00000009106	ENSSLDP00000026345	Uncharacterized protein.	Sphingosine-1-phosphate lyase 1.	0.727
ENSSLDP00000010074	LOC111654403	ENSSLDP00000010074	ENSSLDP00000015513	SHMT domain-containing protein.	Serine--pyruvate aminotransferase.	0.968
ENSSLDP00000010074	LOC111664750	ENSSLDP00000010074	ENSSLDP00000008786	SHMT domain-containing protein.	Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.921
ENSSLDP00000010074	LOC111665965	ENSSLDP00000010074	ENSSLDP00000012678	SHMT domain-containing protein.	Uncharacterized protein.	0.841
ENSSLDP00000010074	LOC111669610	ENSSLDP00000010074	ENSSLDP00000005192	SHMT domain-containing protein.	Serine--pyruvate aminotransferase.	0.968
ENSSLDP00000010074	LOC111670752	ENSSLDP00000010074	ENSSLDP00000032721	SHMT domain-containing protein.	5-aminolevulinate synthase.	0.918
ENSSLDP00000010074	LOC111672180	ENSSLDP00000010074	ENSSLDP00000015086	SHMT domain-containing protein.	5-aminolevulinate synthase.	0.918
ENSSLDP00000010074	LOC111673531	ENSSLDP00000010074	ENSSLDP00000022248	SHMT domain-containing protein.	Threonine aldolase 1.	0.943
ENSSLDP00000010074	LOC111673710	ENSSLDP00000010074	ENSSLDP00000030051	SHMT domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.836
ENSSLDP00000010074	alas1	ENSSLDP00000010074	ENSSLDP00000004764	SHMT domain-containing protein.	5-aminolevulinate synthase.	0.918
ENSSLDP00000010074	cth	ENSSLDP00000010074	ENSSLDP00000004234	SHMT domain-containing protein.	Cystathionase (cystathionine gamma-lyase), like.	0.442
ENSSLDP00000010074	gcat	ENSSLDP00000010074	ENSSLDP00000031678	SHMT domain-containing protein.	Glycine C-acetyltransferase.	0.928
ENSSLDP00000010074	gldc	ENSSLDP00000010074	ENSSLDP00000030622	SHMT domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.983