22 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rras	RAS related. (185 aa)
	RAP2A	RAP2A, member of RAS oncogene family. (183 aa)
	ENSSLDP00000003557	Uncharacterized protein. (79 aa)
	LOC111649083	Zgc:55558. (187 aa)
	ENSSLDP00000018453	Uncharacterized protein. (143 aa)
	rras2	RAS related 2. (202 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (167 aa)
	LOC111655841	RAP2C, member of RAS oncogene family. (183 aa)
	LOC111661323	Uncharacterized protein. (184 aa)
	LOC111650973	RAP1A, member of RAS oncogene family b. (185 aa)
	rheb	Ras homolog, mTORC1 binding. (184 aa)
	rala	V-ral simian leukemia viral oncogene homolog Aa (ras related). (206 aa)
	mras	Muscle RAS oncogene homolog. (208 aa)
	ralb	V-ral simian leukemia viral oncogene homolog Ba (ras related). (222 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	LOC111673125	DIRAS family, GTP-binding RAS-like 1b. (198 aa)
	LOC111667847	Ras homolog, mTORC1 binding like 1. (184 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC111644452	RAP2A, member of RAS oncogene family b. (183 aa)
	LOC111661945	Uncharacterized protein. (185 aa)
	diras1	Uncharacterized protein. (199 aa)
	LOC111646885	Uncharacterized protein. (201 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111646885	LOC111650973	ENSSLDP00000017795	ENSSLDP00000021876	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.405
LOC111646885	LOC111661323	ENSSLDP00000017795	ENSSLDP00000021781	Uncharacterized protein.	Uncharacterized protein.	0.405
LOC111646885	LOC111661945	ENSSLDP00000017795	ENSSLDP00000016623	Uncharacterized protein.	Uncharacterized protein.	0.405
LOC111649083	hras	ENSSLDP00000008447	ENSSLDP00000015907	Zgc:55558.	HRas proto-oncogene, GTPase a.	0.910
LOC111649083	kras	ENSSLDP00000008447	ENSSLDP00000028681	Zgc:55558.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.901
LOC111650973	LOC111646885	ENSSLDP00000021876	ENSSLDP00000017795	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.405
LOC111650973	LOC111661323	ENSSLDP00000021876	ENSSLDP00000021781	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111650973	LOC111661945	ENSSLDP00000021876	ENSSLDP00000016623	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111650973	rala	ENSSLDP00000021876	ENSSLDP00000026460	RAP1A, member of RAS oncogene family b.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.403
LOC111650973	ralb	ENSSLDP00000021876	ENSSLDP00000028473	RAP1A, member of RAS oncogene family b.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.404
LOC111661323	LOC111646885	ENSSLDP00000021781	ENSSLDP00000017795	Uncharacterized protein.	Uncharacterized protein.	0.405
LOC111661323	LOC111650973	ENSSLDP00000021781	ENSSLDP00000021876	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.900
LOC111661323	LOC111661945	ENSSLDP00000021781	ENSSLDP00000016623	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC111661323	rala	ENSSLDP00000021781	ENSSLDP00000026460	Uncharacterized protein.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.403
LOC111661323	ralb	ENSSLDP00000021781	ENSSLDP00000028473	Uncharacterized protein.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.404
LOC111661945	LOC111646885	ENSSLDP00000016623	ENSSLDP00000017795	Uncharacterized protein.	Uncharacterized protein.	0.405
LOC111661945	LOC111650973	ENSSLDP00000016623	ENSSLDP00000021876	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.900
LOC111661945	LOC111661323	ENSSLDP00000016623	ENSSLDP00000021781	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC111661945	rala	ENSSLDP00000016623	ENSSLDP00000026460	Uncharacterized protein.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.402
LOC111661945	ralb	ENSSLDP00000016623	ENSSLDP00000028473	Uncharacterized protein.	V-ral simian leukemia viral oncogene homolog Ba (ras related).	0.405