STRINGSTRING
ctnna1 ctnna1 ctnnal1 ctnnal1 ENSSLDP00000015591 ENSSLDP00000015591 LOC111659112 LOC111659112 ctnna2 ctnna2 LOC111658188 LOC111658188 vcl vcl LOC111667065 LOC111667065 LOC111659609 LOC111659609 ENSSLDP00000028151 ENSSLDP00000028151
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctnna1Catenin (cadherin-associated protein), alpha 1. (769 aa)
ctnnal1Catenin (cadherin-associated protein), alpha-like 1. (756 aa)
ENSSLDP00000015591Uncharacterized protein. (155 aa)
LOC111659112Talin 2a. (2540 aa)
ctnna2Catenin (cadherin-associated protein), alpha 2. (905 aa)
LOC111658188Vinculin a. (1066 aa)
vclVinculin b. (1066 aa)
LOC111667065Talin 2b. (2542 aa)
LOC111659609Talin 1. (2541 aa)
ENSSLDP00000028151Uncharacterized protein. (1332 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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