13 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111655422	Transporter associated with antigen processing, subunit type t, teleost specific. (713 aa)
	LOC111645906	ABC transporter domain-containing protein. (113 aa)
	abcb7	ATP-binding cassette, sub-family B (MDR/TAP), member 7. (746 aa)
	tap1	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (741 aa)
	LOC111661197	Transporter associated with antigen processing, subunit type a. (718 aa)
	abcb6	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (852 aa)
	abcb9	Uncharacterized protein. (813 aa)
	abcb8	ATP-binding cassette, sub-family B (MDR/TAP), member 8. (708 aa)
	abcb1	ATP-binding cassette, sub-family B (MDR/TAP), member 4. (1293 aa)
	LOC111654523	ATP-binding cassette, sub-family B (MDR/TAP), member 11a. (1310 aa)
	ENSSLDP00000029987	ATP-binding cassette, sub-family B (MDR/TAP), member 6b. (260 aa)
	abcb10	ATP-binding cassette, sub-family B (MDR/TAP), member 10. (720 aa)
	LOC111672425	ATP-binding cassette, sub-family B (MDR/TAP), member 11b. (1327 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000029987	LOC111645906	ENSSLDP00000029987	ENSSLDP00000005140	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ABC transporter domain-containing protein.	0.436
ENSSLDP00000029987	LOC111654523	ENSSLDP00000029987	ENSSLDP00000019751	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	0.410
ENSSLDP00000029987	LOC111655422	ENSSLDP00000029987	ENSSLDP00000000759	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	Transporter associated with antigen processing, subunit type t, teleost specific.	0.425
ENSSLDP00000029987	LOC111661197	ENSSLDP00000029987	ENSSLDP00000015603	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	Transporter associated with antigen processing, subunit type a.	0.412
ENSSLDP00000029987	LOC111672425	ENSSLDP00000029987	ENSSLDP00000032757	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ATP-binding cassette, sub-family B (MDR/TAP), member 11b.	0.410
ENSSLDP00000029987	abcb1	ENSSLDP00000029987	ENSSLDP00000018411	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ATP-binding cassette, sub-family B (MDR/TAP), member 4.	0.410
ENSSLDP00000029987	abcb10	ENSSLDP00000029987	ENSSLDP00000031482	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ATP-binding cassette, sub-family B (MDR/TAP), member 10.	0.400
ENSSLDP00000029987	abcb8	ENSSLDP00000029987	ENSSLDP00000017350	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	ATP-binding cassette, sub-family B (MDR/TAP), member 8.	0.402
ENSSLDP00000029987	abcb9	ENSSLDP00000029987	ENSSLDP00000016493	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	Uncharacterized protein.	0.409
ENSSLDP00000029987	tap1	ENSSLDP00000029987	ENSSLDP00000013849	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	0.417
LOC111645906	ENSSLDP00000029987	ENSSLDP00000005140	ENSSLDP00000029987	ABC transporter domain-containing protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	0.436
LOC111645906	abcb7	ENSSLDP00000005140	ENSSLDP00000011137	ABC transporter domain-containing protein.	ATP-binding cassette, sub-family B (MDR/TAP), member 7.	0.608
LOC111654523	ENSSLDP00000029987	ENSSLDP00000019751	ENSSLDP00000029987	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	0.410
LOC111654523	LOC111672425	ENSSLDP00000019751	ENSSLDP00000032757	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	ATP-binding cassette, sub-family B (MDR/TAP), member 11b.	0.901
LOC111654523	abcb6	ENSSLDP00000019751	ENSSLDP00000016389	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	ATP-binding cassette, sub-family B (MDR/TAP), member 6a.	0.410
LOC111654523	abcb7	ENSSLDP00000019751	ENSSLDP00000011137	ATP-binding cassette, sub-family B (MDR/TAP), member 11a.	ATP-binding cassette, sub-family B (MDR/TAP), member 7.	0.547
LOC111655422	ENSSLDP00000029987	ENSSLDP00000000759	ENSSLDP00000029987	Transporter associated with antigen processing, subunit type t, teleost specific.	ATP-binding cassette, sub-family B (MDR/TAP), member 6b.	0.425
LOC111655422	LOC111661197	ENSSLDP00000000759	ENSSLDP00000015603	Transporter associated with antigen processing, subunit type t, teleost specific.	Transporter associated with antigen processing, subunit type a.	0.904
LOC111655422	abcb7	ENSSLDP00000000759	ENSSLDP00000011137	Transporter associated with antigen processing, subunit type t, teleost specific.	ATP-binding cassette, sub-family B (MDR/TAP), member 7.	0.608
LOC111655422	tap1	ENSSLDP00000000759	ENSSLDP00000013849	Transporter associated with antigen processing, subunit type t, teleost specific.	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).	0.924