16 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111651125	Apolipoprotein Eb. (276 aa)
	ENSSLDP00000002244	SRCR domain-containing protein. (309 aa)
	ENSSLDP00000001578	Vitellogenin domain-containing protein. (414 aa)
	ENSSLDP00000001516	Uncharacterized protein. (2718 aa)
	LOC111661577	Vitellogenin domain-containing protein. (3338 aa)
	ENSSLDP00000001389	Vitellogenin domain-containing protein. (390 aa)
	ENSSLDP00000001343	Uncharacterized protein. (405 aa)
	hsp90b1	Heat shock protein 90, beta (grp94), member 1. (797 aa)
	LOC111669159	Calreticulin. (421 aa)
	LOC111671697	Calreticulin. (412 aa)
	apob	Apolipoprotein Ba. (3969 aa)
	COLEC12	Collectin subfamily member 12. (632 aa)
	LOC111653177	Collectin sub-family member 12. (761 aa)
	scara5	Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways. (497 aa)
	ENSSLDP00000005816	Calreticulin. (397 aa)
	LOC111651878	Calreticulin. (425 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000001343	ENSSLDP00000001389	ENSSLDP00000001343	ENSSLDP00000001389	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.569
ENSSLDP00000001343	LOC111651125	ENSSLDP00000001343	ENSSLDP00000002930	Uncharacterized protein.	Apolipoprotein Eb.	0.734
ENSSLDP00000001343	hsp90b1	ENSSLDP00000001343	ENSSLDP00000012283	Uncharacterized protein.	Heat shock protein 90, beta (grp94), member 1.	0.470
ENSSLDP00000001389	ENSSLDP00000001343	ENSSLDP00000001389	ENSSLDP00000001343	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.569
ENSSLDP00000001389	ENSSLDP00000001516	ENSSLDP00000001389	ENSSLDP00000001516	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.483
ENSSLDP00000001389	LOC111651125	ENSSLDP00000001389	ENSSLDP00000002930	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.734
ENSSLDP00000001389	hsp90b1	ENSSLDP00000001389	ENSSLDP00000012283	Vitellogenin domain-containing protein.	Heat shock protein 90, beta (grp94), member 1.	0.470
ENSSLDP00000001516	ENSSLDP00000001389	ENSSLDP00000001516	ENSSLDP00000001389	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.483
ENSSLDP00000001516	ENSSLDP00000001578	ENSSLDP00000001516	ENSSLDP00000001578	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.728
ENSSLDP00000001516	LOC111651125	ENSSLDP00000001516	ENSSLDP00000002930	Uncharacterized protein.	Apolipoprotein Eb.	0.734
ENSSLDP00000001516	hsp90b1	ENSSLDP00000001516	ENSSLDP00000012283	Uncharacterized protein.	Heat shock protein 90, beta (grp94), member 1.	0.470
ENSSLDP00000001578	ENSSLDP00000001516	ENSSLDP00000001578	ENSSLDP00000001516	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.728
ENSSLDP00000001578	LOC111651125	ENSSLDP00000001578	ENSSLDP00000002930	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.734
ENSSLDP00000001578	hsp90b1	ENSSLDP00000001578	ENSSLDP00000012283	Vitellogenin domain-containing protein.	Heat shock protein 90, beta (grp94), member 1.	0.470
ENSSLDP00000005816	hsp90b1	ENSSLDP00000005816	ENSSLDP00000012283	Calreticulin.	Heat shock protein 90, beta (grp94), member 1.	0.944
ENSSLDP00000005816	scara5	ENSSLDP00000005816	ENSSLDP00000006845	Calreticulin.	Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways.	0.436
LOC111651125	ENSSLDP00000001343	ENSSLDP00000002930	ENSSLDP00000001343	Apolipoprotein Eb.	Uncharacterized protein.	0.734
LOC111651125	ENSSLDP00000001389	ENSSLDP00000002930	ENSSLDP00000001389	Apolipoprotein Eb.	Vitellogenin domain-containing protein.	0.734
LOC111651125	ENSSLDP00000001516	ENSSLDP00000002930	ENSSLDP00000001516	Apolipoprotein Eb.	Uncharacterized protein.	0.734
LOC111651125	ENSSLDP00000001578	ENSSLDP00000002930	ENSSLDP00000001578	Apolipoprotein Eb.	Vitellogenin domain-containing protein.	0.734