STRINGSTRING
LOC111666282 LOC111666282 nup85 nup85 LOC111660880 LOC111660880 polr2f polr2f polr2d polr2d polr2l polr2l LOC111651692 LOC111651692 LOC111662719 LOC111662719 LOC111650310 LOC111650310 ENSSLDP00000029509 ENSSLDP00000029509 ENSSLDP00000029498 ENSSLDP00000029498 ENSSLDP00000029476 ENSSLDP00000029476 LOC111650301 LOC111650301 ENSSLDP00000029429 ENSSLDP00000029429 LOC111656245 LOC111656245 ENSSLDP00000029295 ENSSLDP00000029295 ENSSLDP00000029282 ENSSLDP00000029282 ENSSLDP00000029277 ENSSLDP00000029277 ENSSLDP00000029266 ENSSLDP00000029266 ENSSLDP00000029254 ENSSLDP00000029254 ENSSLDP00000029244 ENSSLDP00000029244 ENSSLDP00000029229 ENSSLDP00000029229 LOC111657222 LOC111657222 polr2j polr2j ENSSLDP00000028829 ENSSLDP00000028829 LOC111653432 LOC111653432 ENSSLDP00000028616 ENSSLDP00000028616 ENSSLDP00000028582 ENSSLDP00000028582 ENSSLDP00000028580 ENSSLDP00000028580 ipo7 ipo7 polr2a polr2a nup43 nup43 nup50 nup50 ENSSLDP00000024185 ENSSLDP00000024185 nup35 nup35 ndc1 ndc1 tnrc6a tnrc6a polr2b polr2b nup107 nup107 LOC111649529 LOC111649529 ENSSLDP00000021174 ENSSLDP00000021174 H2AZ1 H2AZ1 nup93 nup93 adgrd1 adgrd1 polr2k polr2k ENSSLDP00000017515 ENSSLDP00000017515 ENSSLDP00000017270 ENSSLDP00000017270 ENSSLDP00000017254 ENSSLDP00000017254 ENSSLDP00000017142 ENSSLDP00000017142 LOC111653258 LOC111653258 ipo8 ipo8 nup98 nup98 LOC111658654 LOC111658654 NUP62 NUP62 nup205 nup205 LOC111653925 LOC111653925 ENSSLDP00000016055 ENSSLDP00000016055 ENSSLDP00000016046 ENSSLDP00000016046 nup153 nup153 nup160 nup160 rae1 rae1 seh1l seh1l nup210 nup210 LOC111662044 LOC111662044 ENSSLDP00000014091 ENSSLDP00000014091 nup155 nup155 nup58 nup58 LOC111661744 LOC111661744 LOC111661474 LOC111661474 LOC111661033 LOC111661033 LOC111660901 LOC111660901 polr2i polr2i aaas aaas ENSSLDP00000010690 ENSSLDP00000010690 LOC111652548 LOC111652548 ENSSLDP00000009960 ENSSLDP00000009960 NUP214 NUP214 LOC111649104 LOC111649104 ENSSLDP00000008616 ENSSLDP00000008616 LOC111663521 LOC111663521 NUP54 NUP54 LOC111650432 LOC111650432 sec13 sec13 LOC111650369 LOC111650369 nup42 nup42 tpr tpr ENSSLDP00000006781 ENSSLDP00000006781 ENSSLDP00000006750 ENSSLDP00000006750 POLR2E POLR2E nup37 nup37 Nup88 Nup88 polr2c polr2c LOC111671172 LOC111671172 LOC111662848-2 LOC111662848-2 ENSSLDP00000003771 ENSSLDP00000003771 ENSSLDP00000003746 ENSSLDP00000003746 LOC111669083 LOC111669083 ENSSLDP00000003637 ENSSLDP00000003637 ENSSLDP00000003600 ENSSLDP00000003600 ENSSLDP00000003493 ENSSLDP00000003493 ENSSLDP00000003415 ENSSLDP00000003415 LOC111645287 LOC111645287 LOC111662848 LOC111662848 ENSSLDP00000003042 ENSSLDP00000003042 ENSSLDP00000003009 ENSSLDP00000003009 ENSSLDP00000002916 ENSSLDP00000002916 polr2h polr2h ENSSLDP00000002822 ENSSLDP00000002822 H3-3B H3-3B polr2g polr2g nup188 nup188 ran ran ENSSLDP00000000546 ENSSLDP00000000546 ENSSLDP00000000372 ENSSLDP00000000372 LOC111654239 LOC111654239 LOC111654238 LOC111654238
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111666282POM121 transmembrane nucleoporin. (1164 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (614 aa)
LOC111660880Histone H2A; Belongs to the histone H2A family. (128 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC111651692Histone domain-containing protein. (131 aa)
LOC111662719RAN binding protein 2. (2916 aa)
LOC111650310Histone H2B 1/2-like. (123 aa)
ENSSLDP00000029509Histone H2B; Belongs to the histone H2B family. (63 aa)
ENSSLDP00000029498Histone H2A; Belongs to the histone H2A family. (158 aa)
ENSSLDP00000029476Histone domain-containing protein; Belongs to the histone H2B family. (110 aa)
LOC111650301Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSSLDP00000029429Histone H3; Belongs to the histone H3 family. (101 aa)
LOC111656245Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSSLDP00000029295Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (98 aa)
ENSSLDP00000029282Histone domain-containing protein. (196 aa)
ENSSLDP00000029277Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSSLDP00000029266Histone H2A; Belongs to the histone H2A family. (253 aa)
ENSSLDP00000029254Histone H2A; Belongs to the histone H2A family. (141 aa)
ENSSLDP00000029244Histone domain-containing protein; Belongs to the histone H2B family. (130 aa)
ENSSLDP00000029229Histone H3; Belongs to the histone H3 family. (106 aa)
LOC111657222Histone H2B 1/2. (124 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ENSSLDP00000028829Histone H2B; Belongs to the histone H2B family. (63 aa)
LOC111653432Translocated promoter region a, nuclear basket protein. (2017 aa)
ENSSLDP00000028616Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
ENSSLDP00000028582Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSSLDP00000028580Histone H2A; Belongs to the histone H2A family. (116 aa)
ipo7Importin 7. (1039 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
nup43Nucleoporin 43. (372 aa)
nup50Nucleoporin 50. (395 aa)
ENSSLDP00000024185Histone H2A; Belongs to the histone H2A family. (141 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (292 aa)
ndc1NDC1 transmembrane nucleoporin. (676 aa)
tnrc6aTrinucleotide repeat containing adaptor 6A. (1903 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (907 aa)
LOC111649529Histone H2B; Belongs to the histone H2B family. (140 aa)
ENSSLDP00000021174Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (144 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (789 aa)
adgrd1Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (808 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
ENSSLDP00000017515Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (88 aa)
ENSSLDP00000017270Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSSLDP00000017254Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSSLDP00000017142annotation not available (95 aa)
LOC111653258Histone H2B; Belongs to the histone H2B family. (116 aa)
ipo8Importin 8. (827 aa)
nup98Nucleoporin 98. (1775 aa)
LOC111658654Histone H3.3. (136 aa)
NUP62Nucleoporin 62. (629 aa)
nup205Nucleoporin 205. (1679 aa)
LOC111653925Histone H2A; Belongs to the histone H2A family. (140 aa)
ENSSLDP00000016055Uncharacterized protein. (306 aa)
ENSSLDP00000016046Histone H2B; Belongs to the histone H2B family. (114 aa)
nup153Nucleoporin 153. (1448 aa)
nup160Nucleoporin 160. (1190 aa)
rae1Ribonucleic acid export 1. (368 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (415 aa)
nup210Nucleoporin 210. (1882 aa)
LOC111662044Histone H4-like. (71 aa)
ENSSLDP00000014091RanBD1 domain-containing protein. (113 aa)
nup155Nucleoporin 155. (1348 aa)
nup58Nucleoporin 58. (569 aa)
LOC111661744Histone domain-containing protein; Belongs to the histone H2B family. (105 aa)
LOC111661474Histone H2B. (67 aa)
LOC111661033Histone domain-containing protein. (109 aa)
LOC111660901Histone H4-like. (71 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (519 aa)
ENSSLDP00000010690Histone H2A; Belongs to the histone H2A family. (143 aa)
LOC111652548Histone H2B 7-like. (67 aa)
ENSSLDP00000009960Histone H3; Belongs to the histone H3 family. (140 aa)
NUP214Nucleoporin 214. (2000 aa)
LOC111649104Histone H2B; Belongs to the histone H2B family. (123 aa)
ENSSLDP00000008616Histone H3; Belongs to the histone H3 family. (92 aa)
LOC111663521Histone H3.3. (136 aa)
NUP54Nucleoporin 54. (582 aa)
LOC111650432Histone H2B; Belongs to the histone H2B family. (120 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
LOC111650369Histone H2B; Belongs to the histone H2B family. (67 aa)
nup42Nucleoporin 42. (500 aa)
tprTranslocated promoter region b, nuclear basket protein. (2223 aa)
ENSSLDP00000006781Nucleoporin 88. (447 aa)
ENSSLDP00000006750Uncharacterized protein. (105 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
nup37Nucleoporin 37. (325 aa)
Nup88Uncharacterized protein. (89 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
LOC111671172Histone domain-containing protein; Belongs to the histone H2B family. (95 aa)
LOC111662848-2Histone H2A; Belongs to the histone H2A family. (139 aa)
ENSSLDP00000003771Histone domain-containing protein. (168 aa)
ENSSLDP00000003746Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (97 aa)
LOC111669083Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
ENSSLDP00000003637Histone domain-containing protein. (105 aa)
ENSSLDP00000003600Histone H2A; Belongs to the histone H2A family. (99 aa)
ENSSLDP00000003493Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSSLDP00000003415Histone H3; Belongs to the histone H3 family. (131 aa)
LOC111645287Histone H2A. (112 aa)
LOC111662848Histone H2A; Belongs to the histone H2A family. (139 aa)
ENSSLDP00000003042Histone H2B; Belongs to the histone H2B family. (120 aa)
ENSSLDP00000003009Histone H2A; Belongs to the histone H2A family. (137 aa)
ENSSLDP00000002916Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSSLDP00000002822Histone H2A; Belongs to the histone H2A family. (130 aa)
H3-3BHistone H3.3. (136 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
nup188Nucleoporin 188. (1751 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
ENSSLDP00000000546Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (61 aa)
ENSSLDP00000000372Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC111654239Histone H3.3. (136 aa)
LOC111654238Histone H3; Belongs to the histone H3 family. (136 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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