30 items (Seriola lalandi) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
	LOC111650604	Uncharacterized protein. (506 aa)
	POLR2E	RNA polymerase II subunit E. (210 aa)
	LOC111659153	Epithelial splicing regulatory protein 2. (717 aa)
	ENSSLDP00000004784	Heterogeneous nuclear ribonucleoprotein A1a. (268 aa)
	polr2c	Polymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	polr2g	Polymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
	polr2l	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	polr2d	Polymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	gtf2f2	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
	LOC111648614	Uncharacterized protein. (129 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	LOC111666014	Cytotoxic granule-associated RNA binding protein 1, like. (385 aa)
	polr2k	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	esrp1	Epithelial splicing regulatory protein 1. (677 aa)
	tia1	Uncharacterized protein. (387 aa)
	LOC111650205	Heterogeneous nuclear ribonucleoprotein M. (677 aa)
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	PTBP3	Polypyrimidine tract binding protein 3. (480 aa)
	LOC111668211	Uncharacterized protein. (499 aa)
	PTBP2	Polypyrimidine tract binding protein 2a. (518 aa)
	tial1	TIA1 cytotoxic granule-associated RNA binding protein-like 1. (374 aa)
	ncbp2	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (199 aa)
	polr2a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
	LOC111673103	Polypyrimidine tract binding protein 1a. (575 aa)
	NCBP1	Nuclear cap binding protein subunit 1. (795 aa)
	polr2j	Polymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
	LOC111652387	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000004784	LOC111648614	ENSSLDP00000004784	ENSSLDP00000011462	Heterogeneous nuclear ribonucleoprotein A1a.	Uncharacterized protein.	0.525
ENSSLDP00000004784	LOC111650205	ENSSLDP00000004784	ENSSLDP00000021544	Heterogeneous nuclear ribonucleoprotein A1a.	Heterogeneous nuclear ribonucleoprotein M.	0.731
ENSSLDP00000004784	LOC111650604	ENSSLDP00000004784	ENSSLDP00000008927	Heterogeneous nuclear ribonucleoprotein A1a.	Uncharacterized protein.	0.525
ENSSLDP00000004784	LOC111652387	ENSSLDP00000004784	ENSSLDP00000028940	Heterogeneous nuclear ribonucleoprotein A1a.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.434
ENSSLDP00000004784	LOC111666014	ENSSLDP00000004784	ENSSLDP00000014341	Heterogeneous nuclear ribonucleoprotein A1a.	Cytotoxic granule-associated RNA binding protein 1, like.	0.449
ENSSLDP00000004784	LOC111668211	ENSSLDP00000004784	ENSSLDP00000024101	Heterogeneous nuclear ribonucleoprotein A1a.	Uncharacterized protein.	0.525
ENSSLDP00000004784	LOC111673103	ENSSLDP00000004784	ENSSLDP00000026904	Heterogeneous nuclear ribonucleoprotein A1a.	Polypyrimidine tract binding protein 1a.	0.525
ENSSLDP00000004784	NCBP1	ENSSLDP00000004784	ENSSLDP00000028369	Heterogeneous nuclear ribonucleoprotein A1a.	Nuclear cap binding protein subunit 1.	0.690
ENSSLDP00000004784	POLR2E	ENSSLDP00000004784	ENSSLDP00000006238	Heterogeneous nuclear ribonucleoprotein A1a.	RNA polymerase II subunit E.	0.593
ENSSLDP00000004784	PTBP2	ENSSLDP00000004784	ENSSLDP00000025339	Heterogeneous nuclear ribonucleoprotein A1a.	Polypyrimidine tract binding protein 2a.	0.525
ENSSLDP00000004784	PTBP3	ENSSLDP00000004784	ENSSLDP00000024071	Heterogeneous nuclear ribonucleoprotein A1a.	Polypyrimidine tract binding protein 3.	0.525
ENSSLDP00000004784	gtf2f1	ENSSLDP00000004784	ENSSLDP00000010971	Heterogeneous nuclear ribonucleoprotein A1a.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.544
ENSSLDP00000004784	gtf2f2	ENSSLDP00000004784	ENSSLDP00000011183	Heterogeneous nuclear ribonucleoprotein A1a.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.434
ENSSLDP00000004784	ncbp2	ENSSLDP00000004784	ENSSLDP00000026249	Heterogeneous nuclear ribonucleoprotein A1a.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.691
ENSSLDP00000004784	polr2a	ENSSLDP00000004784	ENSSLDP00000026588	Heterogeneous nuclear ribonucleoprotein A1a.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.570
ENSSLDP00000004784	polr2b	ENSSLDP00000004784	ENSSLDP00000021557	Heterogeneous nuclear ribonucleoprotein A1a.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.598
ENSSLDP00000004784	polr2c	ENSSLDP00000004784	ENSSLDP00000004470	Heterogeneous nuclear ribonucleoprotein A1a.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.606
ENSSLDP00000004784	polr2d	ENSSLDP00000004784	ENSSLDP00000031887	Heterogeneous nuclear ribonucleoprotein A1a.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.612
ENSSLDP00000004784	polr2f	ENSSLDP00000004784	ENSSLDP00000032416	Heterogeneous nuclear ribonucleoprotein A1a.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.561
ENSSLDP00000004784	polr2g	ENSSLDP00000004784	ENSSLDP00000002213	Heterogeneous nuclear ribonucleoprotein A1a.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.565