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polr2f polr2f mnat1 mnat1 polr2g polr2g polr2h polr2h taf12 taf12 cdk7 cdk7 taf9 taf9 polr2c polr2c gtf2a1 gtf2a1 LOC111656197 LOC111656197 POLR2E POLR2E ENSSLDP00000008454 ENSSLDP00000008454 taf11 taf11 gtf2f1 gtf2f1 ercc3 ercc3 gtf2f2 gtf2f2 polr2i polr2i taf5 taf5 LOC111647896 LOC111647896 LOC111672857 LOC111672857 taf3 taf3 taf4 taf4 LOC111670993 LOC111670993 ENSSLDP00000015085 ENSSLDP00000015085 polr2k polr2k LOC111647417 LOC111647417 gtf2a2 gtf2a2 ENSSLDP00000020317 ENSSLDP00000020317 taf13 taf13 gtf2b gtf2b spag16 spag16 LOC111653959 LOC111653959 taf5l taf5l polr2b polr2b LOC111672326 LOC111672326 ENSSLDP00000021689 ENSSLDP00000021689 ccnh ccnh gtf2h3 gtf2h3 gtf2h5 gtf2h5 ercc2 ercc2 polr2a polr2a taf6 taf6 taf7 taf7 gtf2a1l gtf2a1l gtf2e1 gtf2e1 polr2j polr2j LOC111652387 LOC111652387 taf2 taf2 gtf2h1 gtf2h1 tbpl1 tbpl1 polr2l polr2l tbp tbp taf10 taf10 polr2d polr2d gtf2e2 gtf2e2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
mnat1MNAT1 component of CDK activating kinase. (236 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (153 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
taf9TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
gtf2a1General transcription factor IIA, 1. (351 aa)
LOC111656197Uncharacterized protein. (203 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSSLDP00000008454PH_TFIIH domain-containing protein. (61 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (205 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
ercc3Excision repair cross-complementation group 3. (803 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
LOC111647896General transcription factor IIH subunit. (392 aa)
LOC111672857TATA box binding protein like 2. (320 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
taf4TATA-box binding protein associated factor 4. (996 aa)
LOC111670993TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (881 aa)
ENSSLDP00000015085TAF4 domain-containing protein. (274 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC111647417Si:dkey-219c3.2. (900 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
ENSSLDP00000020317General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (427 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
spag16WD_REPEATS_REGION domain-containing protein. (554 aa)
LOC111653959Transcription initiation factor TFIID subunit. (1990 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC111672326TAFH domain-containing protein. (942 aa)
ENSSLDP00000021689Uncharacterized protein. (167 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (278 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (421 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (373 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (444 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC111652387General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1213 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
tbpl1TBP-like 1. (187 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
tbpTATA box binding protein. (253 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (284 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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