STRINGSTRING
gtf2h5 gtf2h5 polr1e polr1e polr2f polr2f taf1a taf1a polr1a polr1a tbp tbp polr2l polr2l ubtf ubtf gtf2h1 gtf2h1 taf1c taf1c Polr1b Polr1b ercc2 ercc2 polr1c polr1c gtf2h3 gtf2h3 ccnh ccnh ENSSLDP00000021689 ENSSLDP00000021689 ENSSLDP00000020317 ENSSLDP00000020317 LOC111664400 LOC111664400 znrd1 znrd1 POLR1B POLR1B polr2k polr2k twistnb twistnb ENSSLDP00000015128 ENSSLDP00000015128 LOC111672857 LOC111672857 LOC111647896 LOC111647896 ercc3 ercc3 Cavin1 Cavin1 ttf1 ttf1 LOC111659185 LOC111659185 ENSSLDP00000008454 ENSSLDP00000008454 POLR2E POLR2E ENSSLDP00000004562 ENSSLDP00000004562 LOC111662240 LOC111662240 ENSSLDP00000003641 ENSSLDP00000003641 cdk7 cdk7 polr2h polr2h mnat1 mnat1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h5General transcription factor IIH, polypeptide 5. (91 aa)
polr1eRNA polymerase I subunit E. (420 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (428 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1635 aa)
tbpTATA box binding protein. (253 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
ubtfUpstream binding transcription factor. (737 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
taf1cWu:fj64h06. (971 aa)
Polr1bRNA_pol_Rpb2_1 domain-containing protein. (154 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr1cRNA polymerase I and III subunit C. (384 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (278 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSSLDP00000021689Uncharacterized protein. (167 aa)
ENSSLDP00000020317General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (427 aa)
LOC111664400Caveolae associated protein 1b. (468 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
POLR1BRNA polymerase I subunit B; Belongs to the RNA polymerase beta chain family. (516 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
twistnbUncharacterized protein. (380 aa)
ENSSLDP00000015128Uncharacterized protein. (175 aa)
LOC111672857TATA box binding protein like 2. (320 aa)
LOC111647896General transcription factor IIH subunit. (392 aa)
ercc3Excision repair cross-complementation group 3. (803 aa)
Cavin1Caveolae associated protein 1a. (177 aa)
ttf1Si:ch73-376l24.4. (568 aa)
LOC111659185Upstream binding transcription factor, like. (514 aa)
ENSSLDP00000008454PH_TFIIH domain-containing protein. (61 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSSLDP00000004562RPA43_OB domain-containing protein. (311 aa)
LOC111662240CD3e molecule, epsilon associated protein. (343 aa)
ENSSLDP00000003641Uncharacterized protein. (166 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
mnat1MNAT1 component of CDK activating kinase. (236 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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