13 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gab1	GRB2-associated binding protein 1. (758 aa)
	dock7	Dedicator of cytokinesis 7; Belongs to the DOCK family. (2104 aa)
	LOC111656071	Uncharacterized protein. (318 aa)
	LOC111658585	PH domain-containing protein. (571 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1349 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (305 aa)
	LOC111661945	Uncharacterized protein. (185 aa)
	rapgef1	Rap guanine nucleotide exchange factor (GEF) 1b. (1100 aa)
	LOC111661323	Uncharacterized protein. (184 aa)
	LOC111650973	RAP1A, member of RAS oncogene family b. (185 aa)
	hgf	Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. (696 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	LOC111671297	CRK proto-oncogene, adaptor protein. (315 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111650973	LOC111656071	ENSSLDP00000021876	ENSSLDP00000004486	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.534
LOC111650973	LOC111658585	ENSSLDP00000021876	ENSSLDP00000011499	RAP1A, member of RAS oncogene family b.	PH domain-containing protein.	0.455
LOC111650973	LOC111661323	ENSSLDP00000021876	ENSSLDP00000021781	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111650973	LOC111661945	ENSSLDP00000021876	ENSSLDP00000016623	RAP1A, member of RAS oncogene family b.	Uncharacterized protein.	0.900
LOC111650973	LOC111671297	ENSSLDP00000021876	ENSSLDP00000033258	RAP1A, member of RAS oncogene family b.	CRK proto-oncogene, adaptor protein.	0.534
LOC111650973	crkl	ENSSLDP00000021876	ENSSLDP00000013352	RAP1A, member of RAS oncogene family b.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.534
LOC111650973	gab1	ENSSLDP00000021876	ENSSLDP00000032841	RAP1A, member of RAS oncogene family b.	GRB2-associated binding protein 1.	0.455
LOC111650973	grb2	ENSSLDP00000021876	ENSSLDP00000031562	RAP1A, member of RAS oncogene family b.	Growth factor receptor-bound protein 2b.	0.702
LOC111650973	met	ENSSLDP00000021876	ENSSLDP00000011973	RAP1A, member of RAS oncogene family b.	MET proto-oncogene, receptor tyrosine kinase.	0.605
LOC111650973	rapgef1	ENSSLDP00000021876	ENSSLDP00000020197	RAP1A, member of RAS oncogene family b.	Rap guanine nucleotide exchange factor (GEF) 1b.	0.757
LOC111656071	LOC111650973	ENSSLDP00000004486	ENSSLDP00000021876	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.534
LOC111656071	LOC111658585	ENSSLDP00000004486	ENSSLDP00000011499	Uncharacterized protein.	PH domain-containing protein.	0.717
LOC111656071	LOC111661323	ENSSLDP00000004486	ENSSLDP00000021781	Uncharacterized protein.	Uncharacterized protein.	0.534
LOC111656071	LOC111661945	ENSSLDP00000004486	ENSSLDP00000016623	Uncharacterized protein.	Uncharacterized protein.	0.534
LOC111656071	LOC111671297	ENSSLDP00000004486	ENSSLDP00000033258	Uncharacterized protein.	CRK proto-oncogene, adaptor protein.	0.901
LOC111656071	crkl	ENSSLDP00000004486	ENSSLDP00000013352	Uncharacterized protein.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.910
LOC111656071	gab1	ENSSLDP00000004486	ENSSLDP00000032841	Uncharacterized protein.	GRB2-associated binding protein 1.	0.717
LOC111656071	grb2	ENSSLDP00000004486	ENSSLDP00000031562	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.856
LOC111656071	met	ENSSLDP00000004486	ENSSLDP00000011973	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.716
LOC111656071	rapgef1	ENSSLDP00000004486	ENSSLDP00000020197	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 1b.	0.943