26 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111664736	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (805 aa)
	ENSSLDP00000000642	Uncharacterized protein. (1211 aa)
	zdhhc5	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (628 aa)
	LOC111671341	Uncharacterized protein. (1260 aa)
	ENSSLDP00000001366	Uncharacterized protein. (152 aa)
	LOC111659723	ATP-binding cassette, sub-family A (ABC1), member 1A. (2268 aa)
	ENSSLDP00000002464	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (188 aa)
	LOC111658500	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	ENSSLDP00000003645	ABC transporter domain-containing protein. (206 aa)
	LOC111653688	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	ENSSLDP00000005270	MG2 domain-containing protein. (224 aa)
	PTCHD3	Patched domain containing 3. (847 aa)
	ENSSLDP00000010006	Uncharacterized protein; Belongs to the protein kinase superfamily. (337 aa)
	LOC111650623	Uncharacterized protein. (1389 aa)
	ENSSLDP00000010460	ABC transporter domain-containing protein. (180 aa)
	apoa4	Apolipoprotein A-Ib. (285 aa)
	abca2	ATP-binding cassette, sub-family A (ABC1), member 2. (2365 aa)
	plekhd1	Pleckstrin homology domain containing, family D (with coiled-coil domains) member 1. (585 aa)
	smpdl3a	Acid sphingomyelinase-like phosphodiesterase. (442 aa)
	prkaca	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (343 aa)
	zdhhc8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (765 aa)
	LOC111665601	Uncharacterized protein. (2148 aa)
	ptchd4	Patched domain containing 4. (911 aa)
	LOC111647601	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (763 aa)
	PTCHD3-2	Patched domain containing 3. (932 aa)
	ptchd1	Patched domain containing 1. (986 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000001366	LOC111671341	ENSSLDP00000001366	ENSSLDP00000001315	Uncharacterized protein.	Uncharacterized protein.	0.739
LOC111653688	LOC111658500	ENSSLDP00000004665	ENSSLDP00000003336	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC111653688	prkaca	ENSSLDP00000004665	ENSSLDP00000020068	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC111658500	LOC111653688	ENSSLDP00000003336	ENSSLDP00000004665	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC111658500	prkaca	ENSSLDP00000003336	ENSSLDP00000020068	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC111671341	ENSSLDP00000001366	ENSSLDP00000001315	ENSSLDP00000001366	Uncharacterized protein.	Uncharacterized protein.	0.739
prkaca	LOC111653688	ENSSLDP00000020068	ENSSLDP00000004665	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
prkaca	LOC111658500	ENSSLDP00000020068	ENSSLDP00000003336	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900