39 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pdia3	Protein disulfide-isomerase. (497 aa)
	LOC111662090	UDP-glucose glycoprotein glucosyltransferase 2. (1523 aa)
	marchf11	Membrane-associated ring finger (C3HC4) 11. (345 aa)
	LOC111644582	Ubiquitin-like domain-containing protein. (153 aa)
	LOC111644445	KxDL domain-containing protein. (126 aa)
	LOC111671116	RING-CH-type domain-containing protein. (248 aa)
	LOC111652314	Uncharacterized protein. (749 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (602 aa)
	rnf139	Ring finger protein 139. (702 aa)
	LOC111656341	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (876 aa)
	ganab	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (951 aa)
	LOC111669303	RING-CH-type domain-containing protein. (251 aa)
	ENSSLDP00000018516	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (422 aa)
	canx	Calnexin. (583 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1530 aa)
	LOC111671697	Calreticulin. (412 aa)
	edem2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (547 aa)
	LOC111669159	Calreticulin. (421 aa)
	man1b1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (645 aa)
	pdia4	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (633 aa)
	marchf7	RING-CH-type domain-containing protein. (800 aa)
	ENSSLDP00000010825	Ubiquitin-like domain-containing protein. (114 aa)
	MARCHF6	Membrane associated ring-CH-type finger 6. (915 aa)
	rnf103	Ring finger protein 103. (714 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (400 aa)
	LOC111650935	Polyubiquitin-like. (75 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC111657357	Membrane-associated ring finger (C3HC4) 1. (563 aa)
	marchf2	Membrane-associated ring finger (C3HC4) 2. (248 aa)
	ENSSLDP00000005816	Calreticulin. (397 aa)
	LOC111651878	Calreticulin. (425 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (335 aa)
	LOC111645827	Ribosomal_L40e domain-containing protein. (128 aa)
	marchf9	Membrane-associated ring finger (C3HC4) 9. (337 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (638 aa)
	LOC111671234	KxDL motif containing 1. (184 aa)
	LOC111652997	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (849 aa)
	LOC111652963	RING-CH-type domain-containing protein. (864 aa)
	LOC111671125	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000005816	LOC111652314	ENSSLDP00000005816	ENSSLDP00000026419	Calreticulin.	Uncharacterized protein.	0.818
ENSSLDP00000005816	canx	ENSSLDP00000005816	ENSSLDP00000017962	Calreticulin.	Calnexin.	0.818
ENSSLDP00000005816	ganab	ENSSLDP00000005816	ENSSLDP00000019768	Calreticulin.	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.	0.529
ENSSLDP00000005816	pdia3	ENSSLDP00000005816	ENSSLDP00000003672	Calreticulin.	Protein disulfide-isomerase.	0.902
ENSSLDP00000005816	pdia4	ENSSLDP00000005816	ENSSLDP00000011913	Calreticulin.	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.	0.848
ENSSLDP00000010825	LOC111644582	ENSSLDP00000010825	ENSSLDP00000001565	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
ENSSLDP00000010825	rnf103	ENSSLDP00000010825	ENSSLDP00000009351	Ubiquitin-like domain-containing protein.	Ring finger protein 103.	0.457
ENSSLDP00000018516	LOC111652314	ENSSLDP00000018516	ENSSLDP00000026419	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.410
ENSSLDP00000018516	LOC111662090	ENSSLDP00000018516	ENSSLDP00000002744	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 2.	0.405
ENSSLDP00000018516	canx	ENSSLDP00000018516	ENSSLDP00000017962	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calnexin.	0.410
ENSSLDP00000018516	ganab	ENSSLDP00000018516	ENSSLDP00000019768	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.	0.454
ENSSLDP00000018516	uggt1	ENSSLDP00000018516	ENSSLDP00000017935	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 1.	0.405
LOC111644445	LOC111644582	ENSSLDP00000001170	ENSSLDP00000001565	KxDL domain-containing protein.	Ubiquitin-like domain-containing protein.	0.764
LOC111644582	ENSSLDP00000010825	ENSSLDP00000001565	ENSSLDP00000010825	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
LOC111644582	LOC111644445	ENSSLDP00000001565	ENSSLDP00000001170	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.764
LOC111644582	LOC111645827	ENSSLDP00000001565	ENSSLDP00000004985	Ubiquitin-like domain-containing protein.	Ribosomal_L40e domain-containing protein.	0.985
LOC111644582	LOC111650935	ENSSLDP00000001565	ENSSLDP00000009141	Ubiquitin-like domain-containing protein.	Polyubiquitin-like.	0.977
LOC111644582	LOC111671125	ENSSLDP00000001565	ENSSLDP00000026808	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.986
LOC111644582	LOC111671234	ENSSLDP00000001565	ENSSLDP00000031932	Ubiquitin-like domain-containing protein.	KxDL motif containing 1.	0.764
LOC111644582	rnf103	ENSSLDP00000001565	ENSSLDP00000009351	Ubiquitin-like domain-containing protein.	Ring finger protein 103.	0.598