STRINGSTRING
LOC111644662 LOC111644662 tomm40 tomm40 dync1li2 dync1li2 ENSSLDP00000000450 ENSSLDP00000000450 ENSSLDP00000001047 ENSSLDP00000001047 LOC111656030 LOC111656030 LOC111644445 LOC111644445 ENSSLDP00000001502 ENSSLDP00000001502 LOC111644582 LOC111644582 prkn prkn tomm5 tomm5 ENSSLDP00000003407 ENSSLDP00000003407 ENSSLDP00000003823 ENSSLDP00000003823 LOC111645700 LOC111645700 LOC111653704 LOC111653704 LOC111644250 LOC111644250 ENSSLDP00000004900 ENSSLDP00000004900 ENSSLDP00000004932 ENSSLDP00000004932 LOC111644248 LOC111644248 LOC111645827 LOC111645827 LOC111651189 LOC111651189 ENSSLDP00000005306 ENSSLDP00000005306 park7 park7 LOC111644184 LOC111644184 LOC111657931 LOC111657931 LOC111656144 LOC111656144 ENSSLDP00000007635 ENSSLDP00000007635 LOC111650100 LOC111650100 LOC111650146 LOC111650146 hdac6 hdac6 ENSSLDP00000008568 ENSSLDP00000008568 ENSSLDP00000008598 ENSSLDP00000008598 uba52 uba52 LOC111650935 LOC111650935 ENSSLDP00000009608 ENSSLDP00000009608 LOC111661086 LOC111661086 TOMM7 TOMM7 LOC111659794 LOC111659794 LOC111667213 LOC111667213 ILRUN ILRUN LOC111659289 LOC111659289 ENSSLDP00000010825 ENSSLDP00000010825 tomm22 tomm22 LOC111647931 LOC111647931 ENSSLDP00000011443 ENSSLDP00000011443 LOC111671507 LOC111671507 cftr cftr LOC111671506 LOC111671506 LOC111665973 LOC111665973 LOC111663611 LOC111663611 LOC111661184 LOC111661184 ENSSLDP00000013107 ENSSLDP00000013107 LOC111653866 LOC111653866 LOC111655639 LOC111655639 ulk2 ulk2 MAP1LC3A MAP1LC3A LOC111653877 LOC111653877 ENSSLDP00000015022 ENSSLDP00000015022 ENSSLDP00000015191 ENSSLDP00000015191 DYNC1I1 DYNC1I1 mterf3 mterf3 LOC111668532 LOC111668532 pink1 pink1 TUBA1A TUBA1A LOC111645045 LOC111645045 FUNDC1 FUNDC1 arl13b arl13b LOC111661862 LOC111661862 atg5 atg5 tube1 tube1 LOC111655733 LOC111655733 usp30 usp30 tomm20 tomm20 LOC111669889 LOC111669889 mfn2 mfn2 tomm6 tomm6 csnk2a2 csnk2a2 LOC111664932 LOC111664932 LOC111664942 LOC111664942 LOC111649387 LOC111649387 vim vim akap9 akap9 pgam5 pgam5 LOC111665548 LOC111665548 ENSSLDP00000021312 ENSSLDP00000021312 LOC111666143 LOC111666143 atm atm LOC111671234 LOC111671234 LOC111656633 LOC111656633 LOC111651727 LOC111651727 pex5 pex5 LOC111673722 LOC111673722 fndc3b fndc3b tomm70 tomm70 atg12 atg12 LOC111664445 LOC111664445 ube2n ube2n fndc3a fndc3a LOC111671125 LOC111671125 src src LOC111671077 LOC111671077 LOC111672454 LOC111672454 ENSSLDP00000024895 ENSSLDP00000024895 ift88 ift88 ENSSLDP00000024199 ENSSLDP00000024199 LOC111670506 LOC111670506 ENSSLDP00000024112 ENSSLDP00000024112 mfn1 mfn1 LOC111668630 LOC111668630 pex5l pex5l LOC111666171 LOC111666171 vdac1 vdac1 ENSSLDP00000022157 ENSSLDP00000022157 LOC111644561 LOC111644561 LOC111665615 LOC111665615
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC111644662Centrin 4. (171 aa)
tomm40Translocase of outer mitochondrial membrane 40 homolog (yeast). (344 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (477 aa)
ENSSLDP00000000450Tubulin domain-containing protein. (90 aa)
ENSSLDP00000001047Tubulin domain-containing protein. (145 aa)
LOC111656030Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111644445KxDL domain-containing protein. (126 aa)
ENSSLDP00000001502Uncharacterized protein. (206 aa)
LOC111644582Ubiquitin-like domain-containing protein. (153 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (449 aa)
tomm5Translocase of outer mitochondrial membrane 5 homolog (yeast). (51 aa)
ENSSLDP00000003407Tubulin domain-containing protein. (90 aa)
ENSSLDP00000003823Dynein light chain. (62 aa)
LOC111645700Tubulin_C domain-containing protein. (105 aa)
LOC111653704Tubulin domain-containing protein. (152 aa)
LOC111644250Tubulin, alpha 1c; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (255 aa)
ENSSLDP00000004900Tubulin_C domain-containing protein. (129 aa)
ENSSLDP00000004932Tubulin domain-containing protein. (164 aa)
LOC111644248Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (297 aa)
LOC111645827Ribosomal_L40e domain-containing protein. (128 aa)
LOC111651189Uncharacterized protein. (91 aa)
ENSSLDP00000005306Peroxisomal biogenesis factor 5-like b. (342 aa)
park7Parkinson protein 7. (189 aa)
LOC111644184Tyrosine-protein kinase. (550 aa)
LOC111657931Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
LOC111656144NBR1 autophagy cargo receptor a. (992 aa)
ENSSLDP00000007635UBIQUITIN_CONJUGAT_2 domain-containing protein. (59 aa)
LOC111650100Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (217 aa)
LOC111650146Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (172 aa)
hdac6Histone deacetylase 6. (1023 aa)
ENSSLDP00000008568Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (329 aa)
ENSSLDP00000008598Fzo_mitofusin domain-containing protein. (403 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC111650935Polyubiquitin-like. (75 aa)
ENSSLDP00000009608Tubulin domain-containing protein. (79 aa)
LOC111661086Translocase of outer mitochondrial membrane 40 homolog, like. (341 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
LOC111659794Tubulin alpha chain-like. (104 aa)
LOC111667213PB1 domain-containing protein. (1050 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (293 aa)
LOC111659289Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (485 aa)
ENSSLDP00000010825Ubiquitin-like domain-containing protein. (114 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
LOC111647931Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
ENSSLDP00000011443Tubulin domain-containing protein. (147 aa)
LOC111671507Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1505 aa)
LOC111671506Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC111665973Dynein light chain. (89 aa)
LOC111663611UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
LOC111661184Tubulin_C domain-containing protein. (100 aa)
ENSSLDP00000013107Tubulin domain-containing protein. (84 aa)
LOC111653866Dynein light chain. (89 aa)
LOC111655639Unc-51 like autophagy activating kinase 1. (955 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1042 aa)
MAP1LC3AMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
LOC111653877Zgc:109986. (302 aa)
ENSSLDP00000015022GSAP-16 domain-containing protein. (157 aa)
ENSSLDP00000015191Tubulin domain-containing protein. (100 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (593 aa)
mterf3Mitochondrial transcription termination factor 3. (426 aa)
LOC111668532Dynein, cytoplasmic 1, intermediate chain 2a. (607 aa)
pink1PTEN induced kinase 1. (575 aa)
TUBA1ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111645045Unc-51 like autophagy activating kinase 1a. (919 aa)
FUNDC1FUN14 domain containing 1. (182 aa)
arl13bADP-ribosylation factor-like 13b. (389 aa)
LOC111661862Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (451 aa)
LOC111655733Microtubule-associated protein 1 light chain 3 beta. (125 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (519 aa)
tomm20Translocase of outer mitochondrial membrane 20. (146 aa)
LOC111669889Tubulin domain-containing protein. (161 aa)
mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (730 aa)
tomm6Translocase of outer mitochondrial membrane 6 homolog (yeast). (64 aa)
csnk2a2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (299 aa)
LOC111664932Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
LOC111664942Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
LOC111649387Pericentrin. (3471 aa)
vimVimentin like; Belongs to the intermediate filament family. (460 aa)
akap9A-kinase anchoring protein 9. (4118 aa)
pgam5PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (302 aa)
LOC111665548Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
ENSSLDP00000021312Uncharacterized protein. (99 aa)
LOC111666143Dynein light chain. (89 aa)
atmNon-specific serine/threonine protein kinase. (3036 aa)
LOC111671234KxDL motif containing 1. (184 aa)
LOC111656633Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (350 aa)
LOC111651727Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
pex5Peroxisomal biogenesis factor 5. (642 aa)
LOC111673722Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
fndc3bFibronectin type III domain containing 3Ba. (1210 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
LOC111664445Centrin 3. (167 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
fndc3aFibronectin type III domain containing 3A. (1241 aa)
LOC111671125Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
srcTyrosine-protein kinase. (550 aa)
LOC111671077Dynein, cytoplasmic 1, intermediate chain 2b. (634 aa)
LOC111672454Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
ENSSLDP00000024895Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (480 aa)
ift88Intraflagellar transport 88 homolog. (817 aa)
ENSSLDP00000024199Tubulin domain-containing protein. (65 aa)
LOC111670506Tubulin, beta 2A class IIa. (153 aa)
ENSSLDP00000024112Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
LOC111668630Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (393 aa)
pex5lPeroxisomal biogenesis factor 5-like a. (515 aa)
LOC111666171Uncharacterized protein. (331 aa)
vdac1Voltage-dependent anion channel 1. (283 aa)
ENSSLDP00000022157Tubulin domain-containing protein. (107 aa)
LOC111644561Uncharacterized protein. (151 aa)
LOC111665615Sequestosome 1. (431 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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