20 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	npas4	Neuronal PAS domain protein 4a. (936 aa)
	ENSSLDP00000030300	Uncharacterized protein. (209 aa)
	LOC111671932	IQ motif and Sec7 domain 3a. (675 aa)
	LOC111658934	PAS domain-containing protein. (581 aa)
	iqsec2	IQ motif and Sec7 domain 2b. (1539 aa)
	ENSSLDP00000031756	Uncharacterized protein. (102 aa)
	LOC111656659	RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (367 aa)
	LOC111673372	Necdin-like 2. (266 aa)
	ENSSLDP00000012688	SEC7 domain-containing protein. (1151 aa)
	arnt2	Aryl-hydrocarbon receptor nuclear translocator 2. (732 aa)
	IQSEC1	IQ motif and Sec7 domain 1. (1150 aa)
	arntl	Aryl hydrocarbon receptor nuclear translocator-like 1a. (592 aa)
	LOC111652194	Aryl hydrocarbon receptor nuclear translocator. (736 aa)
	LOC111664287	RNA binding fox-1 homolog 3a. (418 aa)
	LOC111668564	IQ motif and Sec7 domain 1b. (1160 aa)
	LOC111657661	Synaptotagmin X. (550 aa)
	syt3	Synaptotagmin III. (558 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (613 aa)
	syt6	Synaptotagmin VIa. (542 aa)
	LOC111655341	Aryl hydrocarbon receptor nuclear translocator-like 2. (639 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL2	ENSSLDP00000031756	ENSSLDP00000022613	ENSSLDP00000031756	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.749
ARNTL2	LOC111658934	ENSSLDP00000022613	ENSSLDP00000031747	Aryl hydrocarbon receptor nuclear translocator like 2.	PAS domain-containing protein.	0.749
ARNTL2	npas4	ENSSLDP00000022613	ENSSLDP00000029641	Aryl hydrocarbon receptor nuclear translocator like 2.	Neuronal PAS domain protein 4a.	0.749
ENSSLDP00000030300	LOC111671932	ENSSLDP00000030300	ENSSLDP00000030325	Uncharacterized protein.	IQ motif and Sec7 domain 3a.	0.490
ENSSLDP00000031756	ARNTL2	ENSSLDP00000031756	ENSSLDP00000022613	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.749
ENSSLDP00000031756	LOC111652194	ENSSLDP00000031756	ENSSLDP00000019438	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.910
ENSSLDP00000031756	LOC111655341	ENSSLDP00000031756	ENSSLDP00000029342	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator-like 2.	0.749
ENSSLDP00000031756	LOC111673372	ENSSLDP00000031756	ENSSLDP00000011029	Uncharacterized protein.	Necdin-like 2.	0.674
ENSSLDP00000031756	arnt2	ENSSLDP00000031756	ENSSLDP00000013777	Uncharacterized protein.	Aryl-hydrocarbon receptor nuclear translocator 2.	0.910
ENSSLDP00000031756	arntl	ENSSLDP00000031756	ENSSLDP00000017402	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator-like 1a.	0.755
LOC111652194	ENSSLDP00000031756	ENSSLDP00000019438	ENSSLDP00000031756	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.910
LOC111652194	LOC111658934	ENSSLDP00000019438	ENSSLDP00000031747	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.910
LOC111652194	npas4	ENSSLDP00000019438	ENSSLDP00000029641	Aryl hydrocarbon receptor nuclear translocator.	Neuronal PAS domain protein 4a.	0.910
LOC111655341	ENSSLDP00000031756	ENSSLDP00000029342	ENSSLDP00000031756	Aryl hydrocarbon receptor nuclear translocator-like 2.	Uncharacterized protein.	0.749
LOC111655341	LOC111658934	ENSSLDP00000029342	ENSSLDP00000031747	Aryl hydrocarbon receptor nuclear translocator-like 2.	PAS domain-containing protein.	0.749
LOC111655341	npas4	ENSSLDP00000029342	ENSSLDP00000029641	Aryl hydrocarbon receptor nuclear translocator-like 2.	Neuronal PAS domain protein 4a.	0.749
LOC111658934	ARNTL2	ENSSLDP00000031747	ENSSLDP00000022613	PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.749
LOC111658934	LOC111652194	ENSSLDP00000031747	ENSSLDP00000019438	PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator.	0.910
LOC111658934	LOC111655341	ENSSLDP00000031747	ENSSLDP00000029342	PAS domain-containing protein.	Aryl hydrocarbon receptor nuclear translocator-like 2.	0.749
LOC111658934	LOC111673372	ENSSLDP00000031747	ENSSLDP00000011029	PAS domain-containing protein.	Necdin-like 2.	0.674