31 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	got2	Aspartate aminotransferase. (428 aa)
	CKB-2	Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
	LOC111651676	Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (415 aa)
	cpeb1	Cytoplasmic polyadenylation element binding protein 1b. (540 aa)
	LOC111644715	G_PROTEIN_RECEP_F1_2 domain-containing protein. (417 aa)
	b4galt4	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4. (348 aa)
	got1	Aspartate aminotransferase. (410 aa)
	LOC111649504	Pyruvate kinase; Belongs to the pyruvate kinase family. (631 aa)
	prkaca	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (343 aa)
	LOC111652196	Pyruvate kinase; Belongs to the pyruvate kinase family. (543 aa)
	LOC111672278	G_PROTEIN_RECEP_F1_2 domain-containing protein. (459 aa)
	CKB	Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family. (384 aa)
	GOT1	Aspartate aminotransferase. (410 aa)
	acox3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (699 aa)
	LOC111651405	Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (394 aa)
	LOC111666013	Creatine kinase, mitochondrial 2a (sarcomeric); Belongs to the ATP:guanido phosphotransferase family. (407 aa)
	LOC111661205	Pyruvate kinase; Belongs to the pyruvate kinase family. (127 aa)
	LOC111658540	Pyruvate kinase; Belongs to the pyruvate kinase family. (530 aa)
	LOC111663541	Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family. (385 aa)
	pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
	sod2	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (227 aa)
	LOC111646191	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (155 aa)
	LOC111653688	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	GNRHR	Gonadotropin releasing hormone receptor. (426 aa)
	LOC111650440	Creatine kinase, mitochondrial 1A; Belongs to the ATP:guanido phosphotransferase family. (415 aa)
	egr1	Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (463 aa)
	LOC111658500	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	LOC111662238	Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (380 aa)
	LOC111666936	G_PROTEIN_RECEP_F1_2 domain-containing protein. (394 aa)
	rbm34	RNA binding motif protein 34. (423 aa)
	gpr1	G protein-coupled receptor 1; Belongs to the G-protein coupled receptor 1 family. (359 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CKB	LOC111663541	ENSSLDP00000018022	ENSSLDP00000008092	Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family.	0.519
CKB-2	LOC111663541	ENSSLDP00000033582	ENSSLDP00000008092	Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family.	0.519
GOT1	got1	ENSSLDP00000016094	ENSSLDP00000024766	Aspartate aminotransferase.	Aspartate aminotransferase.	0.900
GOT1	got2	ENSSLDP00000016094	ENSSLDP00000023880	Aspartate aminotransferase.	Aspartate aminotransferase.	0.970
LOC111649504	LOC111652196	ENSSLDP00000020685	ENSSLDP00000019244	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111649504	LOC111658540	ENSSLDP00000020685	ENSSLDP00000009928	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111649504	got2	ENSSLDP00000020685	ENSSLDP00000023880	Pyruvate kinase; Belongs to the pyruvate kinase family.	Aspartate aminotransferase.	0.405
LOC111651405	LOC111663541	ENSSLDP00000013320	ENSSLDP00000008092	Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family.	0.541
LOC111652196	LOC111649504	ENSSLDP00000019244	ENSSLDP00000020685	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111652196	LOC111658540	ENSSLDP00000019244	ENSSLDP00000009928	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111652196	got2	ENSSLDP00000019244	ENSSLDP00000023880	Pyruvate kinase; Belongs to the pyruvate kinase family.	Aspartate aminotransferase.	0.405
LOC111653688	LOC111658500	ENSSLDP00000004665	ENSSLDP00000003336	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC111653688	prkaca	ENSSLDP00000004665	ENSSLDP00000020068	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC111658500	LOC111653688	ENSSLDP00000003336	ENSSLDP00000004665	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC111658500	prkaca	ENSSLDP00000003336	ENSSLDP00000020068	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.900
LOC111658540	LOC111649504	ENSSLDP00000009928	ENSSLDP00000020685	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111658540	LOC111652196	ENSSLDP00000009928	ENSSLDP00000019244	Pyruvate kinase; Belongs to the pyruvate kinase family.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.901
LOC111658540	got2	ENSSLDP00000009928	ENSSLDP00000023880	Pyruvate kinase; Belongs to the pyruvate kinase family.	Aspartate aminotransferase.	0.405
LOC111661205	got2	ENSSLDP00000012811	ENSSLDP00000023880	Pyruvate kinase; Belongs to the pyruvate kinase family.	Aspartate aminotransferase.	0.405
LOC111663541	CKB	ENSSLDP00000008092	ENSSLDP00000018022	Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family.	0.519