18 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ca7	Carbonic anhydrase VII; Belongs to the alpha-carbonic anhydrase family. (262 aa)
	ca6	Carbonic anhydrase VI; Belongs to the alpha-carbonic anhydrase family. (539 aa)
	LOC111656745	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (538 aa)
	LOC111650669	Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family. (398 aa)
	LOC111658626	Carbonic anhydrase XVb; Belongs to the alpha-carbonic anhydrase family. (315 aa)
	LOC111658716	Uncharacterized protein; Belongs to the alpha-carbonic anhydrase family. (586 aa)
	LOC111650123	Glutamine synthetase. (379 aa)
	ca5a	Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family. (315 aa)
	ca14	Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family. (460 aa)
	LOC111647478	Carbonic anhydrase IV c; Belongs to the alpha-carbonic anhydrase family. (298 aa)
	ca8	Carbonic anhydrase VIII; Belongs to the alpha-carbonic anhydrase family. (306 aa)
	LOC111655241	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (542 aa)
	ca4	Carbonic anhydrase IV a; Belongs to the alpha-carbonic anhydrase family. (307 aa)
	LOC111662623	Glutamine synthetase. (373 aa)
	LOC111673646	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (258 aa)
	LOC111653534	Glutamine synthetase. (371 aa)
	ca12	Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family. (256 aa)
	cps1	Carbamoyl-phosphate synthase 1, mitochondrial. (1506 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111650123	LOC111653534	ENSSLDP00000017971	ENSSLDP00000030588	Glutamine synthetase.	Glutamine synthetase.	0.901
LOC111650123	LOC111655241	ENSSLDP00000017971	ENSSLDP00000021725	Glutamine synthetase.	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.966
LOC111650123	LOC111656745	ENSSLDP00000017971	ENSSLDP00000005197	Glutamine synthetase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.966
LOC111650123	LOC111662623	ENSSLDP00000017971	ENSSLDP00000025553	Glutamine synthetase.	Glutamine synthetase.	0.901
LOC111650123	cps1	ENSSLDP00000017971	ENSSLDP00000031909	Glutamine synthetase.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.955
LOC111650669	ca12	ENSSLDP00000012181	ENSSLDP00000031666	Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family.	Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family.	0.462
LOC111650669	ca14	ENSSLDP00000012181	ENSSLDP00000019767	Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family.	Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family.	0.484
LOC111653534	LOC111650123	ENSSLDP00000030588	ENSSLDP00000017971	Glutamine synthetase.	Glutamine synthetase.	0.901
LOC111653534	LOC111655241	ENSSLDP00000030588	ENSSLDP00000021725	Glutamine synthetase.	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.966
LOC111653534	LOC111656745	ENSSLDP00000030588	ENSSLDP00000005197	Glutamine synthetase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.966
LOC111653534	LOC111662623	ENSSLDP00000030588	ENSSLDP00000025553	Glutamine synthetase.	Glutamine synthetase.	0.900
LOC111653534	cps1	ENSSLDP00000030588	ENSSLDP00000031909	Glutamine synthetase.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.955
LOC111655241	LOC111650123	ENSSLDP00000021725	ENSSLDP00000017971	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.966
LOC111655241	LOC111653534	ENSSLDP00000021725	ENSSLDP00000030588	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.966
LOC111655241	LOC111656745	ENSSLDP00000021725	ENSSLDP00000005197	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.900
LOC111655241	LOC111662623	ENSSLDP00000021725	ENSSLDP00000025553	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.966
LOC111655241	cps1	ENSSLDP00000021725	ENSSLDP00000031909	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Carbamoyl-phosphate synthase 1, mitochondrial.	0.959
LOC111656745	LOC111650123	ENSSLDP00000005197	ENSSLDP00000017971	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.966
LOC111656745	LOC111653534	ENSSLDP00000005197	ENSSLDP00000030588	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamine synthetase.	0.966
LOC111656745	LOC111655241	ENSSLDP00000005197	ENSSLDP00000021725	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.900