28 items (Seriola lalandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	polr2g	Polymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	polr2c	Polymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
	POLR2E	RNA polymerase II subunit E. (210 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	polr3d	Polymerase (RNA) III (DNA directed) polypeptide D. (387 aa)
	polr3k	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
	polr3f	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
	twistnb	Uncharacterized protein. (380 aa)
	polr2k	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	polr3c	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (566 aa)
	znrd1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
	LOC111664401	Zgc:171971. (404 aa)
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	polr3e	Polymerase (RNA) III (DNA directed) polypeptide E. (699 aa)
	polr3h	Polymerase (RNA) III (DNA directed) polypeptide H. (215 aa)
	polr1c	RNA polymerase I and III subunit C. (384 aa)
	polr2a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
	polr3g	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (212 aa)
	polr2j	Polymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
	ENSSLDP00000029588	Uncharacterized protein. (110 aa)
	polr3b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
	LOC111646446	RNA polymerase I and III subunit D. (118 aa)
	polr3a	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1402 aa)
	polr2l	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	polr2d	Polymerase (RNA) II (DNA directed) polypeptide D. (145 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	polr1e	RNA polymerase I subunit E. (420 aa)

Your Current Organism:

Seriola lalandi

NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSLDP00000029588	LOC111646446	ENSSLDP00000029588	ENSSLDP00000031035	Uncharacterized protein.	RNA polymerase I and III subunit D.	0.979
ENSSLDP00000029588	LOC111664401	ENSSLDP00000029588	ENSSLDP00000020399	Uncharacterized protein.	Zgc:171971.	0.953
ENSSLDP00000029588	POLR2E	ENSSLDP00000029588	ENSSLDP00000006238	Uncharacterized protein.	RNA polymerase II subunit E.	0.974
ENSSLDP00000029588	polr1c	ENSSLDP00000029588	ENSSLDP00000023434	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.981
ENSSLDP00000029588	polr2b	ENSSLDP00000029588	ENSSLDP00000021557	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.861
ENSSLDP00000029588	polr2c	ENSSLDP00000029588	ENSSLDP00000004470	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.949
ENSSLDP00000029588	polr2d	ENSSLDP00000029588	ENSSLDP00000031887	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.596
ENSSLDP00000029588	polr2f	ENSSLDP00000029588	ENSSLDP00000032416	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.970
ENSSLDP00000029588	polr2g	ENSSLDP00000029588	ENSSLDP00000002213	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.414
ENSSLDP00000029588	polr2h	ENSSLDP00000029588	ENSSLDP00000002829	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.977
ENSSLDP00000029588	polr2i	ENSSLDP00000029588	ENSSLDP00000011738	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.743
ENSSLDP00000029588	polr2k	ENSSLDP00000029588	ENSSLDP00000017710	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.961
ENSSLDP00000029588	polr2l	ENSSLDP00000029588	ENSSLDP00000031267	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.964
ENSSLDP00000029588	polr3a	ENSSLDP00000029588	ENSSLDP00000031164	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.979
ENSSLDP00000029588	polr3b	ENSSLDP00000029588	ENSSLDP00000029674	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.978
ENSSLDP00000029588	polr3c	ENSSLDP00000029588	ENSSLDP00000019959	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.979
ENSSLDP00000029588	polr3d	ENSSLDP00000029588	ENSSLDP00000012117	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.963
ENSSLDP00000029588	polr3e	ENSSLDP00000029588	ENSSLDP00000022021	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide E.	0.978
ENSSLDP00000029588	polr3f	ENSSLDP00000029588	ENSSLDP00000016088	Uncharacterized protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.983
ENSSLDP00000029588	polr3g	ENSSLDP00000029588	ENSSLDP00000027122	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.900