STRINGSTRING
dync1li2 dync1li2 LOC111655422 LOC111655422 ENSSLDP00000000831 ENSSLDP00000000831 ENSSLDP00000000904 ENSSLDP00000000904 ENSSLDP00000000989 ENSSLDP00000000989 LOC111656030 LOC111656030 LOC111651802 LOC111651802 mrc2 mrc2 LOC111645067 LOC111645067 LOC111658453 LOC111658453 lamp1 lamp1 LOC111666874 LOC111666874 LOC111663463 LOC111663463 LOC111660320 LOC111660320 LOC111646539 LOC111646539 LOC111655505 LOC111655505 LOC111664639 LOC111664639 RAC1 RAC1 atp6v1a atp6v1a itga2 itga2 hgs hgs LOC111644248 LOC111644248 LOC111668415 LOC111668415 colec11 colec11 LOC111644254 LOC111644254 LOC111651878 LOC111651878 LOC111665760 LOC111665760 LOC111656804 LOC111656804 pik3c3 pik3c3 LOC111651893 LOC111651893 ENSSLDP00000007542 ENSSLDP00000007542 LOC111650100 LOC111650100 ENSSLDP00000007847 ENSSLDP00000007847 LOC111650146 LOC111650146 LOC111654383 LOC111654383 LOC111647788 LOC111647788 LOC111656820 LOC111656820 LOC111659838 LOC111659838 LOC111648084 LOC111648084 atp6v0a1 atp6v0a1 LOC111647831 LOC111647831 LOC111659289 LOC111659289 vamp3 vamp3 LOC111669110 LOC111669110 LOC111647931 LOC111647931 LOC111653177 LOC111653177 LOC111671507 LOC111671507 LOC111671506 LOC111671506 pla2r1 pla2r1 atp6v1c1 atp6v1c1 ENSSLDP00000011863 ENSSLDP00000011863 LOC111660918 LOC111660918 LOC111658703 LOC111658703 LOC111669159 LOC111669159 sec61g sec61g LOC111655665 LOC111655665 LOC111655662 LOC111655662 tap1 tap1 LOC111664115 LOC111664115 LOC111659338 LOC111659338 LOC111672569 LOC111672569 LOC111649239 LOC111649239 LOC111659396 LOC111659396 LOC111647354 LOC111647354 ncf4 ncf4 LOC111652636 LOC111652636 ATP6V0C ATP6V0C ENSSLDP00000015191 ENSSLDP00000015191 LOC111670971 LOC111670971 LOC111670952 LOC111670952 LOC111661197 LOC111661197 LOC111671697 LOC111671697 LOC111661201 LOC111661201 ENSSLDP00000015814 ENSSLDP00000015814 LOC111666081 LOC111666081 LOC111668532 LOC111668532 LOC111669221 LOC111669221 sec61b sec61b LOC111669232 LOC111669232 LOC111661862 LOC111661862 LOC111661204 LOC111661204 canx canx LOC111650862 LOC111650862 LOC111650829 LOC111650829 LOC111659220 LOC111659220 actb actb LOC111661895 LOC111661895 LOC111668658 LOC111668658 LOC111661281 LOC111661281 LOC111661251 LOC111661251 atp6v1h atp6v1h LOC111664354 LOC111664354 thbs3 thbs3 c3 c3 LOC111665548 LOC111665548 LOC111655198 LOC111655198 ncf1 ncf1 TUBA1A TUBA1A LOC111668134 LOC111668134 atp6v1f atp6v1f nos1 nos1 ENSSLDP00000022104 ENSSLDP00000022104 LOC111660461 LOC111660461 rab5c rab5c LOC111656392 LOC111656392 LOC111672984 LOC111672984 scarb1 scarb1 LOC111668167 LOC111668167 cd36 cd36 LOC111662160 LOC111662160 itgb3 itgb3 LOC111672373 LOC111672373 LOC111655230 LOC111655230 ENSSLDP00000024112 ENSSLDP00000024112 LOC111657709 LOC111657709 stx18 stx18 ENSSLDP00000024756 ENSSLDP00000024756 LOC111646239 LOC111646239 ENSSLDP00000024895 ENSSLDP00000024895 dync1h1 dync1h1 LOC111647584 LOC111647584 itgb5 itgb5 LOC111666254 LOC111666254 LOC111672454 LOC111672454 LOC111655907 LOC111655907 LOC111659545 LOC111659545 pikfyve pikfyve LOC111671077 LOC111671077 thbs2 thbs2 mrc1 mrc1 DYNC2H1 DYNC2H1 LOC111644678 LOC111644678 LOC111656494 LOC111656494 LOC111645640 LOC111645640 LOC111663195 LOC111663195 eea1 eea1 LOC111667536 LOC111667536 stx12 stx12 LOC111661462 LOC111661462 m6pr m6pr LOC111645642 LOC111645642 ATP6V1B2 ATP6V1B2 ENSSLDP00000030844 ENSSLDP00000030844 LOC111673722 LOC111673722 LOC111645644 LOC111645644 atp6v1d atp6v1d LOC111667707 LOC111667707 atp6v0a2 atp6v0a2 LOC111667766 LOC111667766 comp comp ctsl ctsl tfrc tfrc stx7 stx7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (477 aa)
LOC111655422Transporter associated with antigen processing, subunit type t, teleost specific. (713 aa)
ENSSLDP00000000831Ig-like domain-containing protein. (138 aa)
ENSSLDP00000000904Ig-like domain-containing protein. (361 aa)
ENSSLDP00000000989C-type lectin domain-containing protein. (162 aa)
LOC111656030Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111651802V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (118 aa)
mrc2Mannose receptor, C type 2. (1474 aa)
LOC111645067V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (170 aa)
LOC111658453Integrin beta; Belongs to the integrin beta chain family. (796 aa)
lamp1Lysosomal associated membrane protein 1a. (418 aa)
LOC111666874ATP-synt_ab domain-containing protein. (276 aa)
LOC111663463Integrin beta. (776 aa)
LOC111660320Thrombospondin 4a. (761 aa)
LOC111646539V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (824 aa)
LOC111655505V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (350 aa)
LOC111664639V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (81 aa)
RAC1Rac family small GTPase 1. (192 aa)
atp6v1aATPase H+ transporting V1 subunit A. (617 aa)
itga2Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family. (1183 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (766 aa)
LOC111644248Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (297 aa)
LOC111668415Integrin beta; Belongs to the integrin beta chain family. (803 aa)
colec11Collectin sub-family member 11. (272 aa)
LOC111644254ATPase H+ transporting accessory protein 1b. (448 aa)
LOC111651878Calreticulin. (425 aa)
LOC111665760Uncharacterized protein. (221 aa)
LOC111656804Thrombospondin 4b. (940 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
LOC111651893V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (81 aa)
ENSSLDP00000007542Ig-like domain-containing protein. (79 aa)
LOC111650100Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (217 aa)
ENSSLDP00000007847Uncharacterized protein. (96 aa)
LOC111650146Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (172 aa)
LOC111654383Ig-like domain-containing protein. (292 aa)
LOC111647788Tubulin domain-containing protein. (106 aa)
LOC111656820Uncharacterized protein. (2172 aa)
LOC111659838Integrin beta; Belongs to the integrin beta chain family. (803 aa)
LOC111648084V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (154 aa)
atp6v0a1V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (850 aa)
LOC111647831Zgc:123107. (239 aa)
LOC111659289Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (485 aa)
vamp3V-SNARE coiled-coil homology domain-containing protein. (108 aa)
LOC111669110Cathepsin 12; Belongs to the peptidase C1 family. (329 aa)
LOC111647931Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC111653177Collectin sub-family member 12. (761 aa)
LOC111671507Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
LOC111671506Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
pla2r1Phospholipase A2 receptor 1. (1459 aa)
atp6v1c1V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (383 aa)
ENSSLDP00000011863Ig-like domain-containing protein; Belongs to the MHC class I family. (377 aa)
LOC111660918Uncharacterized protein. (71 aa)
LOC111658703Integrin, alpha M (complement component 3 receptor 3 subunit); Belongs to the integrin alpha chain family. (1106 aa)
LOC111669159Calreticulin. (421 aa)
sec61gSEC61 translocon gamma subunit. (66 aa)
LOC111655665Ig-like domain-containing protein. (254 aa)
LOC111655662Ig-like domain-containing protein. (255 aa)
tap1Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (741 aa)
LOC111664115Syntaxin 12, like; Belongs to the syntaxin family. (266 aa)
LOC111659338RAB5A, member RAS oncogene family, a. (216 aa)
LOC111672569ATP-synt_ab_N domain-containing protein. (176 aa)
LOC111649239Si:dkey-13a21.4. (203 aa)
LOC111659396V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (382 aa)
LOC111647354Ig-like domain-containing protein; Belongs to the MHC class I family. (368 aa)
ncf4Neutrophil cytosolic factor 4. (349 aa)
LOC111652636RAB5A, member RAS oncogene family, b. (216 aa)
ATP6V0CV-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (153 aa)
ENSSLDP00000015191Tubulin domain-containing protein. (100 aa)
LOC111670971Plug_translocon domain-containing protein. (474 aa)
LOC111670952RAB7a, member RAS oncogene family. (207 aa)
LOC111661197Transporter associated with antigen processing, subunit type a. (718 aa)
LOC111671697Calreticulin. (412 aa)
LOC111661201Ig-like domain-containing protein; Belongs to the MHC class I family. (347 aa)
ENSSLDP00000015814Ig-like domain-containing protein. (168 aa)
LOC111666081ATPase H+ transporting V1 subunit E1a. (226 aa)
LOC111668532Dynein, cytoplasmic 1, intermediate chain 2a. (607 aa)
LOC111669221Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family. (337 aa)
sec61bProtein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
LOC111669232Toll-like receptor 18. (879 aa)
LOC111661862Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
LOC111661204Ig-like domain-containing protein; Belongs to the MHC class I family. (354 aa)
canxCalnexin. (583 aa)
LOC111650862Ig-like domain-containing protein. (245 aa)
LOC111650829Ig-like domain-containing protein. (253 aa)
LOC111659220Uncharacterized protein; Belongs to the peptidase C1 family. (328 aa)
actbUncharacterized protein. (375 aa)
LOC111661895Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family. (1088 aa)
LOC111668658Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1052 aa)
LOC111661281V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (355 aa)
LOC111661251SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
atp6v1hV-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (470 aa)
LOC111664354V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (840 aa)
thbs3Thrombospondin 3a. (857 aa)
c3Uncharacterized protein. (1659 aa)
LOC111665548Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC111655198V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (846 aa)
ncf1Neutrophil cytosolic factor 1. (406 aa)
TUBA1ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC111668134Rab interacting lysosomal protein. (430 aa)
atp6v1fV-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (119 aa)
nos1Nitric oxide synthase; Produces nitric oxide (NO). (1428 aa)
ENSSLDP00000022104Tubulin domain-containing protein. (122 aa)
LOC111660461Coronin; Belongs to the WD repeat coronin family. (456 aa)
rab5cRAB5C, member RAS oncogene family. (220 aa)
LOC111656392SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (219 aa)
LOC111672984Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (503 aa)
scarb1Scavenger receptor class B, member 1; Belongs to the CD36 family. (491 aa)
LOC111668167Toll-like receptor 2. (814 aa)
cd36CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. (469 aa)
LOC111662160Lysosomal associated membrane protein 1b. (252 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (789 aa)
LOC111672373Cytochrome b-245, beta polypeptide (chronic granulomatous disease). (565 aa)
LOC111655230Uncharacterized protein. (1147 aa)
ENSSLDP00000024112Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC111657709V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (154 aa)
stx18Syntaxin 18. (324 aa)
ENSSLDP00000024756Uncharacterized protein. (81 aa)
LOC111646239Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (184 aa)
ENSSLDP00000024895Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (480 aa)
dync1h1Dynein, cytoplasmic 1, heavy chain 1. (4640 aa)
LOC111647584Uncharacterized protein. (375 aa)
itgb5Integrin beta; Belongs to the integrin beta chain family. (803 aa)
LOC111666254Uncharacterized protein. (617 aa)
LOC111672454Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC111655907Cathepsin L.1; Belongs to the peptidase C1 family. (334 aa)
LOC111659545RAB5B, member RAS oncogene family. (216 aa)
pikfyvePhosphoinositide kinase, FYVE finger containing. (2139 aa)
LOC111671077Dynein, cytoplasmic 1, intermediate chain 2b. (634 aa)
thbs2Thrombospondin 2a. (1184 aa)
mrc1Mannose receptor, C type 1a. (1307 aa)
DYNC2H1Dynein cytoplasmic 2 heavy chain 1. (4255 aa)
LOC111644678C-type lectin domain-containing protein. (412 aa)
LOC111656494ATPase H+ transporting V1 subunit E1b. (226 aa)
LOC111645640Ig-like domain-containing protein; Belongs to the MHC class I family. (415 aa)
LOC111663195Thrombospondin 1a. (1171 aa)
eea1Early endosome antigen 1. (1400 aa)
LOC111667536Uncharacterized protein. (192 aa)
stx12Syntaxin 12; Belongs to the syntaxin family. (268 aa)
LOC111661462Thrombospondin 1b. (1169 aa)
m6prMannose-6-phosphate receptor (cation dependent). (275 aa)
LOC111645642Ig-like domain-containing protein; Belongs to the MHC class I family. (362 aa)
ATP6V1B2Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (520 aa)
ENSSLDP00000030844Complement component 1, r subcomponent; Belongs to the peptidase S1 family. (706 aa)
LOC111673722Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC111645644Ig-like domain-containing protein; Belongs to the MHC class I family. (333 aa)
atp6v1dATPase H+ transporting V1 subunit D. (248 aa)
LOC111667707Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (171 aa)
atp6v0a2V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (849 aa)
LOC111667766Uncharacterized protein. (207 aa)
compCartilage oligomeric matrix protein. (748 aa)
ctslSi:dkey-26g8.5; Belongs to the peptidase C1 family. (336 aa)
tfrcTransferrin receptor 1b. (756 aa)
stx7Syntaxin 7-like; Belongs to the syntaxin family. (257 aa)
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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