(3 nodes) Glutamate synthase, alpha subunit, C-terminal network (Pelobacter sp. SFB93)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APG28560.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1512 aa)
	APG27805.1	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (771 aa)
	APG27054.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1473 aa)

Your Current Organism:

Pelobacter sp. SFB93

NCBI taxonomy Id: 1842532
Other names: P. sp. SFB93

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APG27054.1	APG27805.1	A7E78_03920	A7E78_08110	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APG27054.1	APG28560.1	A7E78_03920	A7E78_12335	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APG27805.1	APG27054.1	A7E78_08110	A7E78_03920	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APG27805.1	APG28560.1	A7E78_08110	A7E78_12335	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APG28560.1	APG27054.1	A7E78_12335	A7E78_03920	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APG28560.1	APG27805.1	A7E78_12335	A7E78_08110	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999