(3 nodes) Iron dependent repressor, metal binding and dimerisation domain superfamily network (Pelobacter sp. SFB93)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APG26594.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
	APG27135.1	DtxR family iron dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
	APG29157.1	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)

Your Current Organism:

Pelobacter sp. SFB93

NCBI taxonomy Id: 1842532
Other names: P. sp. SFB93

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APG26594.1	APG29157.1	A7E78_01185	A7E78_14085	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
APG27135.1	APG29157.1	A7E78_04365	A7E78_14085	DtxR family iron dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
APG29157.1	APG26594.1	A7E78_14085	A7E78_01185	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
APG29157.1	APG27135.1	A7E78_14085	A7E78_04365	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DtxR family iron dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741