(42 nodes) LysR, substrate-binding network (Acidovorax sp. RAC01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOG22037.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (333 aa)
	AOG21691.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (310 aa)
	AOG22977.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (303 aa)
	AOG25061.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (302 aa)
	AOG22122.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (326 aa)
	AOG22978.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (330 aa)
	AOG22082.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (316 aa)
	AOG24372.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)
	AOG23357.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (319 aa)
	AOG21546.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (291 aa)
	AOG23055.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)
	AOG23432.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (311 aa)
	AOG21459.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (312 aa)
	AOG23500.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)
	AOG23277.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)
	AOG22948.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (311 aa)
	AOG25327.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (313 aa)
	AOG24535.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (318 aa)
	AOG21454.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)
	AOG25157.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)
	AOG21466.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)
	AOG23660.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (359 aa)
	AOG23764.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (313 aa)
	AOG23022.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (302 aa)
	AOG21972.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (325 aa)
	AOG22848.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)
	BSY15_325	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (291 aa)
	AOG22690.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)
	AOG24388.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (295 aa)
	AOG21925.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (303 aa)
	cmpR	HTH-type transcriptional activator CmpR; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)
	AOG24567.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)
	AOG24039.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (319 aa)
	AOG24722.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (313 aa)
	AOG25201.1	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)
	BSY15_43	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (341 aa)
	BSY15_438	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (349 aa)
	BSY15_463	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)
	BSY15_827	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (335 aa)
	BSY15_858	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)
	BSY15_921	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (300 aa)
	BSY15_967	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (307 aa)

Your Current Organism:

Acidovorax sp. RAC01

NCBI taxonomy Id: 1842533
Other names: A. sp. RAC01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOG21454.1	AOG21459.1	BSY15_2479	BSY15_2109	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.550
AOG21454.1	AOG21546.1	BSY15_2479	BSY15_1700	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.767
AOG21454.1	AOG21925.1	BSY15_2479	BSY15_3670	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.771
AOG21454.1	AOG21972.1	BSY15_2479	BSY15_3087	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.487
AOG21454.1	AOG22037.1	BSY15_2479	BSY15_1055	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.766
AOG21454.1	AOG22122.1	BSY15_2479	BSY15_1210	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.745
AOG21454.1	AOG22690.1	BSY15_2479	BSY15_3395	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.567
AOG21454.1	AOG22848.1	BSY15_2479	BSY15_3093	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.638
AOG21454.1	AOG22948.1	BSY15_2479	BSY15_2351	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.691
AOG21454.1	AOG22977.1	BSY15_2479	BSY15_1065	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.764
AOG21454.1	AOG22978.1	BSY15_2479	BSY15_1222	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.714
AOG21454.1	AOG23022.1	BSY15_2479	BSY15_2790	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.703
AOG21454.1	AOG23055.1	BSY15_2479	BSY15_1727	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.704
AOG21454.1	AOG23277.1	BSY15_2479	BSY15_2191	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.502
AOG21454.1	AOG23357.1	BSY15_2479	BSY15_1623	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.745
AOG21454.1	AOG23764.1	BSY15_2479	BSY15_2714	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.660
AOG21454.1	AOG24039.1	BSY15_2479	BSY15_3936	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.768
AOG21454.1	AOG24372.1	BSY15_2479	BSY15_1413	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.661
AOG21454.1	AOG24388.1	BSY15_2479	BSY15_3511	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.418
AOG21454.1	AOG24535.1	BSY15_2479	BSY15_2417	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.	0.531