Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOF83921.1 | AOF84359.1 | BSY239_2050 | BSY239_1239 | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | 0.946 |
| AOF83921.1 | AOF87119.1 | BSY239_2050 | BSY239_3297 | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | ACT domain protein; [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.537 |
| AOF83921.1 | ilvA-2 | BSY239_2050 | BSY239_3950 | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.466 |
| AOF83921.1 | ilvN | BSY239_2050 | BSY239_1623 | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | Acolac_sm: acetolactate synthase, small subunit; [E] COG0440 Acetolactate synthase, small (regulatory) subunit. | 0.884 |
| AOF83921.1 | pheA | BSY239_2050 | BSY239_1120 | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | CM_P2: chorismate mutase; [E] COG0077 Prephenate dehydratase. | 0.709 |
| AOF84145.1 | AOF84336.1 | BSY239_2675 | BSY239_1964 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.987 |
| AOF84145.1 | ilvN | BSY239_2675 | BSY239_1623 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Acolac_sm: acetolactate synthase, small subunit; [E] COG0440 Acetolactate synthase, small (regulatory) subunit. | 0.411 |
| AOF84145.1 | pheA | BSY239_2675 | BSY239_1120 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | CM_P2: chorismate mutase; [E] COG0077 Prephenate dehydratase. | 0.455 |
| AOF84336.1 | AOF84145.1 | BSY239_1964 | BSY239_2675 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.987 |
| AOF84336.1 | ilvN | BSY239_1964 | BSY239_1623 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Acolac_sm: acetolactate synthase, small subunit; [E] COG0440 Acetolactate synthase, small (regulatory) subunit. | 0.411 |
| AOF84336.1 | pheA | BSY239_1964 | BSY239_1120 | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | CM_P2: chorismate mutase; [E] COG0077 Prephenate dehydratase. | 0.455 |
| AOF84359.1 | AOF83921.1 | BSY239_1239 | BSY239_2050 | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | 0.946 |
| AOF84359.1 | ilvA-2 | BSY239_1239 | BSY239_3950 | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.456 |
| AOF84359.1 | pheA | BSY239_1239 | BSY239_1120 | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | CM_P2: chorismate mutase; [E] COG0077 Prephenate dehydratase. | 0.833 |
| AOF84359.1 | purU | BSY239_1239 | BSY239_87 | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.443 |
| AOF87119.1 | AOF83921.1 | BSY239_3297 | BSY239_2050 | ACT domain protein; [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | 0.537 |
| ilvA-2 | AOF83921.1 | BSY239_3950 | BSY239_2050 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | ACT domain protein; [E] COG0460 Homoserine dehydrogenase. | 0.466 |
| ilvA-2 | AOF84359.1 | BSY239_3950 | BSY239_1239 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Asp_kin_monofn: aspartate kinase, monofunctional class; [E] COG0527 Aspartokinases; Belongs to the aspartokinase family. | 0.456 |
| ilvA-2 | ilvN | BSY239_3950 | BSY239_1623 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Acolac_sm: acetolactate synthase, small subunit; [E] COG0440 Acetolactate synthase, small (regulatory) subunit. | 0.992 |
| ilvA-2 | pheA | BSY239_3950 | BSY239_1120 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | CM_P2: chorismate mutase; [E] COG0077 Prephenate dehydratase. | 0.501 |
page 1 of 2