Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APW36284.1 | APW36285.1 | RD110_02885 | RD110_02890 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| APW36284.1 | APW36286.1 | RD110_02885 | RD110_02895 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.685 |
| APW36284.1 | APW39462.1 | RD110_02885 | RD110_21430 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.913 |
| APW36284.1 | APW40956.1 | RD110_02885 | RD110_25490 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| APW36284.1 | argD | RD110_02885 | RD110_21435 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.586 |
| APW36284.1 | argH | RD110_02885 | RD110_17795 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
| APW36284.1 | argJ | RD110_02885 | RD110_06810 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.915 |
| APW36284.1 | proA | RD110_02885 | RD110_02905 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.481 |
| APW36284.1 | putA | RD110_02885 | RD110_16905 | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.536 |
| APW36285.1 | APW36284.1 | RD110_02890 | RD110_02885 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | 0.990 |
| APW36285.1 | APW36286.1 | RD110_02890 | RD110_02895 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.858 |
| APW36285.1 | APW37062.1 | RD110_02890 | RD110_07525 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proline dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW36285.1 | proA | RD110_02890 | RD110_02905 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.598 |
| APW36285.1 | proC | RD110_02890 | RD110_02260 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.936 |
| APW36285.1 | putA | RD110_02890 | RD110_16905 | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.956 |
| APW36286.1 | APW36284.1 | RD110_02895 | RD110_02885 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. | 0.685 |
| APW36286.1 | APW36285.1 | RD110_02895 | RD110_02890 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.858 |
| APW36286.1 | proA | RD110_02895 | RD110_02905 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.545 |
| APW37062.1 | APW36285.1 | RD110_07525 | RD110_02890 | Proline dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW37062.1 | proC | RD110_07525 | RD110_02260 | Proline dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.900 |
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