Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APW36134.1 | APW39046.1 | RD110_02020 | RD110_19040 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APW36134.1 | APW39679.1 | RD110_02020 | RD110_22780 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW36134.1 | APW40045.1 | RD110_02020 | RD110_24935 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| APW36134.1 | APW40047.1 | RD110_02020 | RD110_24945 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.812 |
| APW36134.1 | APW40936.1 | RD110_02020 | RD110_24535 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW36134.1 | RD110_24930 | RD110_02020 | RD110_24930 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease BN; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.661 |
| APW36134.1 | hmgA | RD110_02020 | RD110_24940 | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.685 |
| APW37518.1 | APW40045.1 | RD110_10225 | RD110_24935 | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| APW37518.1 | APW40047.1 | RD110_10225 | RD110_24945 | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.660 |
| APW37518.1 | RD110_24930 | RD110_10225 | RD110_24930 | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease BN; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| APW37518.1 | hmgA | RD110_10225 | RD110_24940 | Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.659 |
| APW39046.1 | APW36134.1 | RD110_19040 | RD110_02020 | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APW39046.1 | APW39679.1 | RD110_19040 | RD110_22780 | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| APW39046.1 | APW40045.1 | RD110_19040 | RD110_24935 | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
| APW39046.1 | APW40936.1 | RD110_19040 | RD110_24535 | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| APW39046.1 | hmgA | RD110_19040 | RD110_24940 | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.541 |
| APW39679.1 | APW36134.1 | RD110_22780 | RD110_02020 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW39679.1 | APW39046.1 | RD110_22780 | RD110_19040 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| APW39679.1 | APW40045.1 | RD110_22780 | RD110_24935 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APW39679.1 | APW40936.1 | RD110_22780 | RD110_24535 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
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