STRINGSTRING
APW40380.1 APW40380.1 APW40382.1 APW40382.1 APW36055.1 APW36055.1 APW36056.1 APW36056.1 APW36300.1 APW36300.1 APW36549.1 APW36549.1 APW36550.1 APW36550.1 APW36586.1 APW36586.1 APW40511.1 APW40511.1 APW40551.1 APW40551.1 APW37305.1 APW37305.1 RD110_09770 RD110_09770 APW37689.1 APW37689.1 APW37777.1 APW37777.1 APW37782.1 APW37782.1 APW37877.1 APW37877.1 APW40652.1 APW40652.1 APW37905.1 APW37905.1 APW37909.1 APW37909.1 APW37910.1 APW37910.1 APW38011.1 APW38011.1 APW38193.1 APW38193.1 APW38194.1 APW38194.1 APW38201.1 APW38201.1 APW38304.1 APW38304.1 APW38305.1 APW38305.1 APW38306.1 APW38306.1 APW38307.1 APW38307.1 APW38354.1 APW38354.1 APW38407.1 APW38407.1 APW38529.1 APW38529.1 APW38530.1 APW38530.1 APW38532.1 APW38532.1 APW38533.1 APW38533.1 APW38589.1 APW38589.1 APW38590.1 APW38590.1 APW38591.1 APW38591.1 APW38780.1 APW38780.1 APW40790.1 APW40790.1 APW38941.1 APW38941.1 APW38942.1 APW38942.1 APW39069.1 APW39069.1 APW39070.1 APW39070.1 APW39071.1 APW39071.1 APW39072.1 APW39072.1 APW39526.1 APW39526.1 APW39583.1 APW39583.1 APW39734.1 APW39734.1 APW39750.1 APW39750.1 APW39753.1 APW39753.1 APW39955.1 APW39955.1 APW40034.1 APW40034.1 APW40984.1 APW40984.1 APW40272.1 APW40272.1 APW40273.1 APW40273.1 APW40274.1 APW40274.1 APW40275.1 APW40275.1 APW40277.1 APW40277.1 APW40278.1 APW40278.1 APW40279.1 APW40279.1 APW40304.1 APW40304.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW40380.1acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)
APW40382.1Aspartate aminotransferase family protein; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
APW36055.1Acyl CoA:acetate/3-ketoacid CoA transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. (527 aa)
APW36056.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
APW36300.13-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
APW36549.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (799 aa)
APW36550.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
APW36586.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (477 aa)
APW40511.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
APW40551.1Methylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
APW37305.1propionate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
RD110_09770MarR family transcriptional regulator; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
APW37689.1malonyl-CoA decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
APW37777.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
APW37782.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (263 aa)
APW37877.1Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
APW40652.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
APW37905.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (565 aa)
APW37909.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
APW37910.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
APW38011.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
APW38193.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
APW38194.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
APW38201.1Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
APW38304.1Methylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
APW38305.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
APW38306.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
APW38307.13-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. (298 aa)
APW38354.1Acyl CoA:acetate/3-ketoacid CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
APW38407.1DNA alkylation response protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
APW38529.13-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
APW38530.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
APW38532.1Phosphotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
APW38533.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
APW38589.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
APW38590.1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
APW38591.1Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
APW38780.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
APW40790.1isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
APW38941.1acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (709 aa)
APW38942.1methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
APW39069.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
APW39070.13-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
APW39071.13-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
APW39072.13-oxoadipyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
APW39526.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (263 aa)
APW39583.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
APW39734.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
APW39750.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
APW39753.1acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
APW39955.1Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
APW40034.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
APW40984.1fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
APW40272.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
APW40273.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
APW40274.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
APW40275.1Multifunctional fatty acid oxidation complex subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (716 aa)
APW40277.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
APW40278.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (274 aa)
APW40279.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)
APW40304.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (380 aa)
Your Current Organism:
Rhodoferax koreense
NCBI taxonomy Id: 1842727
Other names: JCM 31441, KCTC 52288, R. koreense, Rhodoferax sp. DCY110, strain DCY110
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