STRINGSTRING
APW35964.1 APW35964.1 APW40391.1 APW40391.1 APW35965.1 APW35965.1 APW35966.1 APW35966.1 APW36718.1 APW36718.1 APW36719.1 APW36719.1 APW36720.1 APW36720.1 APW40512.1 APW40512.1 APW36874.1 APW36874.1 APW36875.1 APW36875.1 APW36876.1 APW36876.1 APW36877.1 APW36877.1 APW40513.1 APW40513.1 APW36878.1 APW36878.1 APW36879.1 APW36879.1 APW37331.1 APW37331.1 APW40600.1 APW40600.1 APW37471.1 APW37471.1 APW38231.1 APW38231.1 APW38652.1 APW38652.1 APW38765.1 APW38765.1 APW38766.1 APW38766.1 APW38767.1 APW38767.1 APW39618.1 APW39618.1 APW39619.1 APW39619.1 APW39620.1 APW39620.1 RD110_24505 RD110_24505 APW39976.1 APW39976.1 APW40050.1 APW40050.1 APW40051.1 APW40051.1 APW40052.1 APW40052.1 APW40160.1 APW40160.1 APW40161.1 APW40161.1 APW40162.1 APW40162.1 APW40163.1 APW40163.1 APW40210.1 APW40210.1 APW40211.1 APW40211.1 APW40212.1 APW40212.1 APW40248.1 APW40248.1 macB macB APW40250.1 APW40250.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW35964.1Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1054 aa)
APW40391.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (549 aa)
APW35965.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
APW35966.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
APW36718.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
APW36719.1Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (1085 aa)
APW36720.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)
APW40512.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
APW36874.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
APW36875.1Multidrug transporter subunit MdtC; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1049 aa)
APW36876.1Multidrug transporter subunit MdtB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1052 aa)
APW36877.1Multidrug transporter subunit MdtA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (483 aa)
APW40513.1GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
APW36878.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
APW36879.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
APW37331.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
APW40600.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (378 aa)
APW37471.1Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1069 aa)
APW38231.1Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
APW38652.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (860 aa)
APW38765.1Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
APW38766.1Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
APW38767.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (450 aa)
APW39618.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
APW39619.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (372 aa)
APW39620.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1017 aa)
RD110_24505Efflux transporter periplasmic adaptor subunit; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (1055 aa)
APW39976.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
APW40050.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa)
APW40051.1Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (1055 aa)
APW40052.1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
APW40160.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1042 aa)
APW40161.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (393 aa)
APW40162.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
APW40163.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
APW40210.1Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1063 aa)
APW40211.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
APW40212.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
APW40248.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
macBMacrolide ABC transporter permease/ATP-binding protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (654 aa)
APW40250.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
Your Current Organism:
Rhodoferax koreense
NCBI taxonomy Id: 1842727
Other names: JCM 31441, KCTC 52288, R. koreense, Rhodoferax sp. DCY110, strain DCY110
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