STRINGSTRING
APW36718.1 APW36718.1 APW36719.1 APW36719.1 APW36720.1 APW36720.1 APW37331.1 APW37331.1 APW38231.1 APW38231.1 RD110_24505 RD110_24505 APW39976.1 APW39976.1 APW40050.1 APW40050.1 APW40051.1 APW40051.1 APW40052.1 APW40052.1 APW40210.1 APW40210.1 APW40211.1 APW40211.1 APW40212.1 APW40212.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW36718.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
APW36719.1Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (1085 aa)
APW36720.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)
APW37331.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
APW38231.1Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
RD110_24505Efflux transporter periplasmic adaptor subunit; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (1055 aa)
APW39976.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
APW40050.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa)
APW40051.1Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (1055 aa)
APW40052.1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
APW40210.1Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1063 aa)
APW40211.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
APW40212.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
Your Current Organism:
Rhodoferax koreense
NCBI taxonomy Id: 1842727
Other names: JCM 31441, KCTC 52288, R. koreense, Rhodoferax sp. DCY110, strain DCY110
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