Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APW35920.1 | APW36348.1 | RD110_00750 | RD110_03260 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| APW35920.1 | APW36360.1 | RD110_00750 | RD110_03345 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| APW35920.1 | APW36441.1 | RD110_00750 | RD110_03865 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Low-specificity L-threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.937 |
| APW35920.1 | APW36738.1 | RD110_00750 | RD110_05650 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| APW35920.1 | APW37434.1 | RD110_00750 | RD110_09730 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.810 |
| APW35920.1 | APW37834.1 | RD110_00750 | RD110_12010 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family. | 0.462 |
| APW35920.1 | APW38027.1 | RD110_00750 | RD110_13175 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.810 |
| APW35920.1 | APW38040.1 | RD110_00750 | RD110_13255 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| APW35920.1 | APW38045.1 | RD110_00750 | RD110_13285 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| APW35920.1 | APW38049.1 | RD110_00750 | RD110_13305 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family. | 0.462 |
| APW35920.1 | APW38423.1 | RD110_00750 | RD110_15480 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family. | 0.462 |
| APW35920.1 | APW38939.1 | RD110_00750 | RD110_18445 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| APW35920.1 | APW39398.1 | RD110_00750 | RD110_21055 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.924 |
| APW35920.1 | APW39874.1 | RD110_00750 | RD110_23900 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| APW35920.1 | APW39958.1 | RD110_00750 | RD110_24410 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| APW35920.1 | APW40742.1 | RD110_00750 | RD110_16315 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.810 |
| APW35920.1 | APW40947.1 | RD110_00750 | RD110_25095 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| APW35920.1 | edd | RD110_00750 | RD110_13150 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.532 |
| APW35920.1 | ilvA | RD110_00750 | RD110_06095 | Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Threonine ammonia-lyase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.917 |
| APW35949.1 | APW35950.1 | RD110_00925 | RD110_00930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
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