STRINGSTRING
APW35858.1 APW35858.1 APW35960.1 APW35960.1 APW36035.1 APW36035.1 APW36043.1 APW36043.1 aroE aroE APW36264.1 APW36264.1 APW36267.1 APW36267.1 APW36300.1 APW36300.1 APW36317.1 APW36317.1 APW36323.1 APW36323.1 APW36348.1 APW36348.1 RD110_03290 RD110_03290 APW36427.1 APW36427.1 APW36450.1 APW36450.1 APW36519.1 APW36519.1 APW36539.1 APW36539.1 APW36542.1 APW36542.1 APW40464.1 APW40464.1 APW36549.1 APW36549.1 APW36727.1 APW36727.1 zwf zwf APW36845.1 APW36845.1 APW36921.1 APW36921.1 APW36988.1 APW36988.1 leuB leuB APW37006.1 APW37006.1 mdh mdh APW37024.1 APW37024.1 gpsA gpsA APW37260.1 APW37260.1 APW37290.1 APW37290.1 murB murB APW40585.1 APW40585.1 APW37374.1 APW37374.1 APW37434.1 APW37434.1 APW37437.1 APW37437.1 fcl fcl APW37489.1 APW37489.1 APW37508.1 APW37508.1 APW37604.1 APW37604.1 APW37831.1 APW37831.1 APW40643.1 APW40643.1 APW40672.1 APW40672.1 APW38038.1 APW38038.1 APW38050.1 APW38050.1 guaB guaB APW38077.1 APW38077.1 APW38174.1 APW38174.1 APW38194.1 APW38194.1 ilvC ilvC APW38307.1 APW38307.1 APW38317.1 APW38317.1 APW38326.1 APW38326.1 APW40722.1 APW40722.1 APW38358.1 APW38358.1 APW38420.1 APW38420.1 APW38514.1 APW38514.1 APW38527.1 APW38527.1 APW38529.1 APW38529.1 APW40742.1 APW40742.1 APW38573.1 APW38573.1 APW38657.1 APW38657.1 APW38685.1 APW38685.1 APW38773.1 APW38773.1 APW39014.1 APW39014.1 APW39038.1 APW39038.1 APW39128.1 APW39128.1 dxr dxr APW39209.1 APW39209.1 pdxA pdxA APW39304.1 APW39304.1 hisD hisD APW39414.1 APW39414.1 APW39440.1 APW39440.1 APW39494.1 APW39494.1 APW39560.1 APW39560.1 APW39632.1 APW39632.1 APW39656.1 APW39656.1 APW39684.1 APW39684.1 APW39685.1 APW39685.1 APW39821.1 APW39821.1 APW39874.1 APW39874.1 APW39948.1 APW39948.1 APW39958.1 APW39958.1 APW39981.1 APW39981.1 APW40043.1 APW40043.1 APW40069.1 APW40069.1 APW40072.1 APW40072.1 aroE-2 aroE-2 APW40076.1 APW40076.1 APW40078.1 APW40078.1 APW40182.1 APW40182.1 APW40274.1 APW40274.1 APW40275.1 APW40275.1 APW40345.1 APW40345.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW35858.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (333 aa)
APW35960.12-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
APW36035.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
APW36043.1Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
aroEShikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (280 aa)
APW36264.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
APW36267.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APW36300.13-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
APW36317.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (317 aa)
APW36323.13-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
APW36348.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
RD110_03290Transposase; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
APW36427.1Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
APW36450.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (309 aa)
APW36519.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (296 aa)
APW36539.1Malate/lactate/ureidoglycolate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family. (351 aa)
APW36542.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
APW40464.1Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
APW36549.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (799 aa)
APW36727.14-hydroxythreonine-4-phosphate dehydrogenase PdxA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family. (344 aa)
zwfGlucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (492 aa)
APW36845.14-hydroxythreonine-4-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family. (338 aa)
APW36921.1D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
APW36988.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (362 aa)
APW37006.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (328 aa)
APW37024.1Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
gpsAGlycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (346 aa)
APW37260.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
APW37290.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (350 aa)
APW40585.14-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
APW37374.13-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (308 aa)
APW37434.1D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
APW37437.1L-idonate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
fclGDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (329 aa)
APW37489.1UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
APW37508.1dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
APW37604.1Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
APW37831.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
APW40643.1Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
APW40672.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
APW38038.1Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
APW38050.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
guaBIMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (489 aa)
APW38077.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (300 aa)
APW38174.14-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
APW38194.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (338 aa)
APW38307.13-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. (298 aa)
APW38317.1Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
APW38326.1Alcohol dehydrogenase AdhP; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
APW40722.1Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (474 aa)
APW38358.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
APW38420.1Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (312 aa)
APW38514.1NADP-dependent isocitrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
APW38527.13-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (335 aa)
APW38529.13-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
APW40742.1D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (328 aa)
APW38573.1S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)
APW38657.1Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
APW38685.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
APW38773.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (310 aa)
APW39014.1Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
APW39038.1Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (374 aa)
APW39128.1NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
dxr1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (392 aa)
APW39209.1Isocitrate dehydrogenase; Catalyzes the formation of 2-oxoglutarate from isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
pdxA4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). (350 aa)
APW39304.1Isocitrate dehydrogenase (NADP(+)); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family. (745 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (438 aa)
APW39414.1Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
APW39440.1D-3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (410 aa)
APW39494.1GDP-mannose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (426 aa)
APW39560.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
APW39632.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
APW39656.13-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (308 aa)
APW39684.1L-idonate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
APW39685.1Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
APW39821.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
APW39874.1Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
APW39948.1Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
APW39958.1Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
APW39981.1Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (317 aa)
APW40043.1NADH-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
APW40069.1Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
APW40072.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
aroE-2Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (273 aa)
APW40076.12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (309 aa)
APW40078.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
APW40182.14,5-dihydroxyphthalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
APW40274.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
APW40275.1Multifunctional fatty acid oxidation complex subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (716 aa)
APW40345.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
Your Current Organism:
Rhodoferax koreense
NCBI taxonomy Id: 1842727
Other names: JCM 31441, KCTC 52288, R. koreense, Rhodoferax sp. DCY110, strain DCY110
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