STRINGSTRING
gyrB gyrB APW35905.1 APW35905.1 APW35908.1 APW35908.1 APW35927.1 APW35927.1 APW35978.1 APW35978.1 APW36001.1 APW36001.1 APW36146.1 APW36146.1 APW36235.1 APW36235.1 htpG htpG APW36413.1 APW36413.1 APW36572.1 APW36572.1 APW36582.1 APW36582.1 APW36657.1 APW36657.1 APW36660.1 APW36660.1 APW36679.1 APW36679.1 RD110_05335 RD110_05335 APW36712.1 APW36712.1 APW36794.1 APW36794.1 APW36841.1 APW36841.1 APW37216.1 APW37216.1 APW40564.1 APW40564.1 APW37245.1 APW37245.1 APW37249.1 APW37249.1 APW40569.1 APW40569.1 APW37285.1 APW37285.1 APW37292.1 APW37292.1 APW37539.1 APW37539.1 mutL mutL parE parE APW40635.1 APW40635.1 APW40636.1 APW40636.1 APW37786.1 APW37786.1 APW37850.1 APW37850.1 APW40655.1 APW40655.1 APW37913.1 APW37913.1 APW40659.1 APW40659.1 APW37918.1 APW37918.1 APW37968.1 APW37968.1 APW38007.1 APW38007.1 RD110_13425 RD110_13425 APW38178.1 APW38178.1 APW38184.1 APW38184.1 APW38185.1 APW38185.1 APW38186.1 APW38186.1 APW40692.1 APW40692.1 APW38278.1 APW38278.1 APW38384.1 APW38384.1 APW38398.1 APW38398.1 RD110_15890 RD110_15890 APW38562.1 APW38562.1 APW38831.1 APW38831.1 APW38835.1 APW38835.1 APW38873.1 APW38873.1 APW38937.1 APW38937.1 APW38947.1 APW38947.1 APW38948.1 APW38948.1 APW40804.1 APW40804.1 APW39118.1 APW39118.1 APW40831.1 APW40831.1 APW39457.1 APW39457.1 APW39570.1 APW39570.1 APW39580.1 APW39580.1 APW39588.1 APW39588.1 APW40881.1 APW40881.1 APW39640.1 APW39640.1 APW40887.1 APW40887.1 APW39652.1 APW39652.1 APW39699.1 APW39699.1 APW40903.1 APW40903.1 APW39782.1 APW39782.1 APW39883.1 APW39883.1 APW40938.1 APW40938.1 APW40949.1 APW40949.1 APW40954.1 APW40954.1 APW40955.1 APW40955.1 APW40140.1 APW40140.1 APW40208.1 APW40208.1 APW40229.1 APW40229.1 APW40980.1 APW40980.1 APW40299.1 APW40299.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gyrBDNA topoisomerase (ATP-hydrolyzing) subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...] (868 aa)
APW35905.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (874 aa)
APW35908.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1254 aa)
APW35927.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (1170 aa)
APW35978.1Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system. (466 aa)
APW36001.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
APW36146.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
APW36235.1Sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (929 aa)
htpGMolecular chaperone HtpG; Molecular chaperone. Has ATPase activity. (648 aa)
APW36413.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (771 aa)
APW36572.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
APW36582.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1956 aa)
APW36657.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
APW36660.1Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (717 aa)
APW36679.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
RD110_05335Phosphate starvation-inducible protein PhoH; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
APW36712.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
APW36794.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (2110 aa)
APW36841.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
APW37216.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (889 aa)
APW40564.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (805 aa)
APW37245.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (883 aa)
APW37249.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
APW40569.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
APW37285.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (945 aa)
APW37292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (634 aa)
APW37539.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
mutLAlpha/beta hydrolase; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (667 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (664 aa)
APW40635.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
APW40636.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
APW37786.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
APW37850.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (749 aa)
APW40655.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
APW37913.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1168 aa)
APW40659.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
APW37918.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
APW37968.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
APW38007.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
RD110_13425Two-component system response regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
APW38178.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1224 aa)
APW38184.1Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
APW38185.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
APW38186.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
APW40692.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)
APW38278.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1133 aa)
APW38384.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
APW38398.1Phosphate regulon sensor histidine kinase PhoR; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
RD110_15890Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa)
APW38562.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
APW38831.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
APW38835.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
APW38873.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (1217 aa)
APW38937.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (907 aa)
APW38947.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
APW38948.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1171 aa)
APW40804.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
APW39118.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
APW40831.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
APW39457.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (704 aa)
APW39570.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (786 aa)
APW39580.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
APW39588.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1361 aa)
APW40881.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
APW39640.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)
APW40887.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa)
APW39652.1Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (842 aa)
APW39699.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
APW40903.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
APW39782.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1297 aa)
APW39883.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
APW40938.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
APW40949.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)
APW40954.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
APW40955.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
APW40140.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1022 aa)
APW40208.1Two-component sensor histidine kinase; Member of a two-component regulatory system. (463 aa)
APW40229.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
APW40980.1PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (684 aa)
APW40299.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
Your Current Organism:
Rhodoferax koreense
NCBI taxonomy Id: 1842727
Other names: JCM 31441, KCTC 52288, R. koreense, Rhodoferax sp. DCY110, strain DCY110
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