Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APW35900.1 | APW35901.1 | RD110_00645 | RD110_00650 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| APW35900.1 | APW36000.1 | RD110_00645 | RD110_01250 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| APW35901.1 | APW35900.1 | RD110_00650 | RD110_00645 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| APW35901.1 | APW36000.1 | RD110_00650 | RD110_01250 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
| APW36000.1 | APW35900.1 | RD110_01250 | RD110_00645 | Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| APW36000.1 | APW35901.1 | RD110_01250 | RD110_00650 | Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
| APW36003.1 | nagZ | RD110_01265 | RD110_07035 | AmpG family muropeptide MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.617 |
| APW37331.1 | APW38231.1 | RD110_09105 | RD110_14335 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| APW37331.1 | APW39976.1 | RD110_09105 | RD110_24510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| APW37331.1 | APW40050.1 | RD110_09105 | RD110_24960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.962 |
| APW37331.1 | APW40051.1 | RD110_09105 | RD110_24965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| APW37331.1 | APW40052.1 | RD110_09105 | RD110_24970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| APW38231.1 | APW37331.1 | RD110_14335 | RD110_09105 | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| APW38231.1 | APW39976.1 | RD110_14335 | RD110_24510 | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| APW38231.1 | APW40050.1 | RD110_14335 | RD110_24960 | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.937 |
| APW38231.1 | APW40051.1 | RD110_14335 | RD110_24965 | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.930 |
| APW38231.1 | APW40052.1 | RD110_14335 | RD110_24970 | Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| APW39338.1 | ftsI | RD110_20705 | RD110_24075 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.590 |
| APW39338.1 | mrdA | RD110_20705 | RD110_01375 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. | 0.633 |
| APW39976.1 | APW37331.1 | RD110_24510 | RD110_09105 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
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