(26 nodes) Mixed, incl. Butanoate metabolism, and Electron transfer flavoprotein domain network (Sphingobium sp. RAC03)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Your Input:
	pcaF	pcaF: 3-oxoadipyl-CoA thiolase; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
	BSY17_103	pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit; [I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (221 aa)
	BSY17_104	pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit; [I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (235 aa)
	AOF97936.1	AMP-binding enzyme family protein; [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming). (592 aa)
	AOF97327.1	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. (292 aa)
	AOF97748.1	[C] COG2025 Electron transfer flavoprotein, alpha subunit. (309 aa)
	AOF96803.1	[C] COG2086 Electron transfer flavoprotein, beta subunit. (249 aa)
	AOF97444.1	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (379 aa)
	AOF97332.1	AMP-binding enzyme family protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (611 aa)
	AOF95941.1	pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit; [I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (236 aa)
	AOF96265.1	pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit; [I] COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (211 aa)
	BSY17_234	Pyridine nucleotide-disulfide oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone. (550 aa)
	AOF95632.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (253 aa)
	AOF98303.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (296 aa)
	BSY17_263	acCoA-C-Actrans: acetyl-CoA C-acyltransferase family protein; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
	AOF96171.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase. (725 aa)
	AOF96672.1	acCoA-C-Actrans: acetyl-CoA C-acyltransferase family protein; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
	AOF98323.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
	mmsB	HIBADH: 3-hydroxyisobutyrate dehydrogenase; [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the HIBADH-related family. (294 aa)
	AOF97730.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (352 aa)
	AOF95470.1	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (380 aa)
	AOF98317.1	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (266 aa)
	BSY17_317	AMP-binding enzyme family protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (566 aa)
	BSY17_453	[C] COG2025 Electron transfer flavoprotein, alpha subunit. (309 aa)
	BSY17_454	[C] COG2086 Electron transfer flavoprotein, beta subunit. (249 aa)
	BSY17_691	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases. (600 aa)

Your Current Organism:

Sphingobium sp. RAC03

NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOF95470.1	AOF95632.1	BSY17_2705	BSY17_2357	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.571
AOF95470.1	AOF96171.1	BSY17_2705	BSY17_2694	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.	0.946
AOF95470.1	AOF96672.1	BSY17_2705	BSY17_2695	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	acCoA-C-Actrans: acetyl-CoA C-acyltransferase family protein; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.705
AOF95470.1	AOF96803.1	BSY17_2705	BSY17_2012	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	[C] COG2086 Electron transfer flavoprotein, beta subunit.	0.676
AOF95470.1	AOF97327.1	BSY17_2705	BSY17_1521	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.	0.762
AOF95470.1	AOF97332.1	BSY17_2705	BSY17_2200	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	AMP-binding enzyme family protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.	0.922
AOF95470.1	AOF97730.1	BSY17_2705	BSY17_2704	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.889
AOF95470.1	AOF97748.1	BSY17_2705	BSY17_2011	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	[C] COG2025 Electron transfer flavoprotein, alpha subunit.	0.805
AOF95470.1	AOF97936.1	BSY17_2705	BSY17_1479	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	AMP-binding enzyme family protein; [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming).	0.970
AOF95470.1	AOF98303.1	BSY17_2705	BSY17_2558	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.585
AOF95470.1	AOF98317.1	BSY17_2705	BSY17_2729	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.760
AOF95470.1	AOF98323.1	BSY17_2705	BSY17_2700	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.838
AOF95470.1	BSY17_234	BSY17_2705	BSY17_234	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	Pyridine nucleotide-disulfide oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.	0.549
AOF95470.1	BSY17_263	BSY17_2705	BSY17_263	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	acCoA-C-Actrans: acetyl-CoA C-acyltransferase family protein; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.697
AOF95470.1	BSY17_317	BSY17_2705	BSY17_317	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	AMP-binding enzyme family protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.	0.933
AOF95470.1	BSY17_453	BSY17_2705	BSY17_453	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	[C] COG2025 Electron transfer flavoprotein, alpha subunit.	0.806
AOF95470.1	BSY17_454	BSY17_2705	BSY17_454	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	[C] COG2086 Electron transfer flavoprotein, beta subunit.	0.676
AOF95470.1	mmsB	BSY17_2705	BSY17_2703	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	HIBADH: 3-hydroxyisobutyrate dehydrogenase; [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the HIBADH-related family.	0.710
AOF95470.1	pcaF	BSY17_2705	BSY17_100	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	pcaF: 3-oxoadipyl-CoA thiolase; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.697
AOF95632.1	AOF95470.1	BSY17_2357	BSY17_2705	enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.	Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.	0.571