(32 nodes) Peptidyl-histidine modification, and Transcriptional regulatory protein, C terminal network (Sphingobium sp. RAC03)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOF96674.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (807 aa)
	AOF98129.1	GGDEF: diguanylate cyclase domain protein; [T] COG2203 FOG: GAF domain. (331 aa)
	AOF96557.1	[T] COG2200 FOG: EAL domain. (256 aa)
	BSY17_145	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. (457 aa)
	AOF98470.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (749 aa)
	AOF97335.1	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (258 aa)
	AOF98154.1	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain. (195 aa)
	AOF95596.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (935 aa)
	AOF97535.1	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain. (593 aa)
	AOF96870.1	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain. (508 aa)
	AOF95910.1	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (207 aa)
	AOF95465.1	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain. (313 aa)
	BSY17_212	GGDEF: diguanylate cyclase domain protein; [T] COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. (238 aa)
	AOF96584.1	Response regulator; [T] COG0784 FOG: CheY-like receiver. (121 aa)
	AOF97329.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (242 aa)
	AOF95480.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)
	AOF98279.1	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (438 aa)
	AOF96288.1	[T] COG0642 Signal transduction histidine kinase. (663 aa)
	AOF96722.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (553 aa)
	AOF97952.1	Conserved hypothetical protein; [S] COG5385 Uncharacterized protein conserved in bacteria. (215 aa)
	AOF97651.1	Response regulator; [T] COG0642 Signal transduction histidine kinase. (1119 aa)
	AOF96008.1	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (660 aa)
	BSY17_257	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (767 aa)
	AOF96079.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (235 aa)
	AOF98268.1	Sensory box protein; [T] COG0642 Signal transduction histidine kinase. (671 aa)
	AOF97616.1	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain. (654 aa)
	BSY17_478	[T] COG0642 Signal transduction histidine kinase. (1119 aa)
	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain. (684 aa)
	BSY17_802	Response regulator; [T] COG0784 FOG: CheY-like receiver. (125 aa)
	BSY17_865	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (447 aa)
	BSY17_867	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (239 aa)
	BSY17_892	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (569 aa)

Your Current Organism:

Sphingobium sp. RAC03

NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOF95465.1	AOF95596.1	BSY17_2079	BSY17_1736	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.656
AOF95465.1	AOF96008.1	BSY17_2079	BSY17_2557	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.621
AOF95465.1	AOF96288.1	BSY17_2079	BSY17_2312	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	[T] COG0642 Signal transduction histidine kinase.	0.925
AOF95465.1	AOF96557.1	BSY17_2079	BSY17_1261	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	[T] COG2200 FOG: EAL domain.	0.845
AOF95465.1	AOF96584.1	BSY17_2079	BSY17_2134	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.475
AOF95465.1	AOF96674.1	BSY17_2079	BSY17_1120	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.765
AOF95465.1	AOF96722.1	BSY17_2079	BSY17_2511	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.658
AOF95465.1	AOF96870.1	BSY17_2079	BSY17_1911	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.823
AOF95465.1	AOF97335.1	BSY17_2079	BSY17_1615	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	0.427
AOF95465.1	AOF97535.1	BSY17_2079	BSY17_1846	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	0.687
AOF95465.1	AOF97616.1	BSY17_2079	BSY17_2859	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.912
AOF95465.1	AOF97651.1	BSY17_2079	BSY17_2555	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Response regulator; [T] COG0642 Signal transduction histidine kinase.	0.811
AOF95465.1	AOF98129.1	BSY17_2079	BSY17_1167	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2203 FOG: GAF domain.	0.682
AOF95465.1	AOF98154.1	BSY17_2079	BSY17_1644	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.	0.873
AOF95465.1	AOF98268.1	BSY17_2079	BSY17_2815	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.751
AOF95465.1	AOF98470.1	BSY17_2079	BSY17_1614	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	Sensory box protein; [T] COG0642 Signal transduction histidine kinase.	0.873
AOF95465.1	BSY17_257	BSY17_2079	BSY17_257	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.773
AOF95465.1	BSY17_478	BSY17_2079	BSY17_478	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	[T] COG0642 Signal transduction histidine kinase.	0.666
AOF95465.1	BSY17_527	BSY17_2079	BSY17_527	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG2200 FOG: EAL domain.	0.884
AOF95465.1	BSY17_892	BSY17_2079	BSY17_892	GGDEF: diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.	GGDEF: diguanylate cyclase domain protein; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.668