(10 nodes) Two-component regulatory system, and Peptidyl-aspartic acid modification network (Sphingobium sp. RAC03)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BSY17_145	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. (457 aa)
	AOF95910.1	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (207 aa)
	AOF97329.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (242 aa)
	AOF95480.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)
	AOF98279.1	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (438 aa)
	AOF97952.1	Conserved hypothetical protein; [S] COG5385 Uncharacterized protein conserved in bacteria. (215 aa)
	AOF96079.1	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (235 aa)
	BSY17_802	Response regulator; [T] COG0784 FOG: CheY-like receiver. (125 aa)
	BSY17_865	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. (447 aa)
	BSY17_867	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (239 aa)

Your Current Organism:

Sphingobium sp. RAC03

NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOF95480.1	AOF98279.1	BSY17_2234	BSY17_2235	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.977
AOF95480.1	BSY17_145	BSY17_2234	BSY17_145	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase.	0.810
AOF95480.1	BSY17_865	BSY17_2234	BSY17_865	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.874
AOF95910.1	AOF97329.1	BSY17_1960	BSY17_2230	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.771
AOF95910.1	AOF98279.1	BSY17_1960	BSY17_2235	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.700
AOF95910.1	BSY17_145	BSY17_1960	BSY17_145	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase.	0.825
AOF95910.1	BSY17_802	BSY17_1960	BSY17_802	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.640
AOF95910.1	BSY17_865	BSY17_1960	BSY17_865	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.774
AOF95910.1	BSY17_867	BSY17_1960	BSY17_867	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.759
AOF96079.1	AOF97952.1	BSY17_2793	BSY17_2542	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Conserved hypothetical protein; [S] COG5385 Uncharacterized protein conserved in bacteria.	0.960
AOF96079.1	AOF98279.1	BSY17_2793	BSY17_2235	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.666
AOF96079.1	BSY17_145	BSY17_2793	BSY17_145	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase.	0.776
AOF96079.1	BSY17_802	BSY17_2793	BSY17_802	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.695
AOF96079.1	BSY17_865	BSY17_2793	BSY17_865	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.740
AOF97329.1	AOF95910.1	BSY17_2230	BSY17_1960	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.771
AOF97329.1	AOF98279.1	BSY17_2230	BSY17_2235	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.862
AOF97329.1	BSY17_145	BSY17_2230	BSY17_145	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase.	0.737
AOF97329.1	BSY17_802	BSY17_2230	BSY17_802	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	Response regulator; [T] COG0784 FOG: CheY-like receiver.	0.426
AOF97329.1	BSY17_865	BSY17_2230	BSY17_865	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.	0.844
AOF97952.1	AOF96079.1	BSY17_2542	BSY17_2793	Conserved hypothetical protein; [S] COG5385 Uncharacterized protein conserved in bacteria.	Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.	0.960