Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOF96095.1 | AOF96100.1 | BSY17_3010 | BSY17_3009 | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.889 |
| AOF96095.1 | AOF97432.1 | BSY17_3010 | BSY17_3006 | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.705 |
| AOF96095.1 | AOF97462.1 | BSY17_3010 | BSY17_3007 | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.703 |
| AOF96095.1 | ntrC | BSY17_3010 | BSY17_3008 | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.811 |
| AOF96100.1 | AOF96095.1 | BSY17_3009 | BSY17_3010 | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.889 |
| AOF96100.1 | AOF97432.1 | BSY17_3009 | BSY17_3006 | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.897 |
| AOF96100.1 | AOF97462.1 | BSY17_3009 | BSY17_3007 | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.731 |
| AOF96100.1 | ntrC | BSY17_3009 | BSY17_3008 | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.996 |
| AOF97432.1 | AOF96095.1 | BSY17_3006 | BSY17_3010 | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.705 |
| AOF97432.1 | AOF96100.1 | BSY17_3006 | BSY17_3009 | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.897 |
| AOF97432.1 | AOF97462.1 | BSY17_3006 | BSY17_3007 | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.994 |
| AOF97432.1 | ntrC | BSY17_3006 | BSY17_3008 | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.637 |
| AOF97462.1 | AOF96095.1 | BSY17_3007 | BSY17_3010 | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.703 |
| AOF97462.1 | AOF96100.1 | BSY17_3007 | BSY17_3009 | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.731 |
| AOF97462.1 | AOF97432.1 | BSY17_3007 | BSY17_3006 | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.994 |
| AOF97462.1 | ntrC | BSY17_3007 | BSY17_3008 | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.704 |
| ntrC | AOF96095.1 | BSY17_3008 | BSY17_3010 | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | TIM-barrel, nifR3 family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.811 |
| ntrC | AOF96100.1 | BSY17_3008 | BSY17_3009 | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.996 |
| ntrC | AOF97432.1 | BSY17_3008 | BSY17_3006 | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | Bacterial regulatory, Fis family protein; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.637 |
| ntrC | AOF97462.1 | BSY17_3008 | BSY17_3007 | Nitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | HAMP domain protein; [T] COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation. | 0.704 |